Gene : AL5G26780 A. lyrata v2.1

Defline:  (1 of 15) 3.2.1.14 - Chitinase / Poly-beta-glucosaminidase Genomic Order:  1438
Name:  ? AL5G26780 Secondary Identifier:  ? PAC:35921146

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-6902 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G26780 0.5kb upstream 0.5kb upstream 1760   true scaffold_5: 13277933-13279692 Arabidopsis lyrata
AL5G26780 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 13277933-13278432 Arabidopsis lyrata
AL5G26780 0.5kb downstream 0.5kb downstream 1760   true scaffold_5: 13278433-13280192 Arabidopsis lyrata
AL5G26780 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 13279693-13280192 Arabidopsis lyrata
AL5G26780 1.0kb upstream 1.0kb upstream 2260   true scaffold_5: 13277433-13279692 Arabidopsis lyrata
AL5G26780 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 13277433-13278432 Arabidopsis lyrata
AL5G26780 1.0kb downstream 1.0kb downstream 2260   true scaffold_5: 13278433-13280692 Arabidopsis lyrata
AL5G26780 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 13279693-13280692 Arabidopsis lyrata
AL5G26780 2.0kb upstream 2.0kb upstream 3260   true scaffold_5: 13276433-13279692 Arabidopsis lyrata
AL5G26780 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 13276433-13278432 Arabidopsis lyrata
AL5G26780 2.0kb downstream 2.0kb downstream 3260   true scaffold_5: 13278433-13281692 Arabidopsis lyrata
AL5G26780 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 13279693-13281692 Arabidopsis lyrata
AL5G26780 5.0kb upstream 5.0kb upstream 6260   true scaffold_5: 13273433-13279692 Arabidopsis lyrata
AL5G26780 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 13273433-13278432 Arabidopsis lyrata
AL5G26780 5.0kb downstream 5.0kb downstream 6260   true scaffold_5: 13278433-13284692 Arabidopsis lyrata
AL5G26780 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 13279693-13284692 Arabidopsis lyrata
AL5G26780 10.0kb upstream 10.0kb upstream 11260   true scaffold_5: 13268433-13279692 Arabidopsis lyrata
AL5G26780 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 13268433-13278432 Arabidopsis lyrata
AL5G26780 10.0kb downstream 10.0kb downstream 11260   true scaffold_5: 13278433-13289692 Arabidopsis lyrata
AL5G26780 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 13279693-13289692 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041402 5273 Angiosperm View MSA
122382229 5261 Brassicaceae View MSA
123803761 5264 Brassicales-Malvales View MSA
124352051 5266 SBM View MSA
124252147 5268 Malvidae View MSA
124072738 5270 Rosid View MSA
123744755 5271 Pentapetalae View MSA
122789729 5272 Eudicot View MSA
121351498 5274 Embryophyte View MSA
123382192 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain