Gene : AL5G30510 A. lyrata v2.1
Defline:  (1 of 1) PTHR16166//PTHR16166:SF98 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 // SUBFAMILY NOT NAMED Genomic Order:  1786
Name:  ? AL5G30510 Secondary Identifier:  ? PAC:35918489
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0 Pathways

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G30510 0.5kb upstream 0.5kb upstream 14763   true scaffold_5: 15088982-15103744 Arabidopsis lyrata
AL5G30510 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 15103245-15103744 Arabidopsis lyrata
AL5G30510 0.5kb downstream 0.5kb downstream 14763   true scaffold_5: 15088482-15103244 Arabidopsis lyrata
AL5G30510 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 15088482-15088981 Arabidopsis lyrata
AL5G30510 1.0kb upstream 1.0kb upstream 15263   true scaffold_5: 15088982-15104244 Arabidopsis lyrata
AL5G30510 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 15103245-15104244 Arabidopsis lyrata
AL5G30510 1.0kb downstream 1.0kb downstream 15263   true scaffold_5: 15087982-15103244 Arabidopsis lyrata
AL5G30510 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 15087982-15088981 Arabidopsis lyrata
AL5G30510 2.0kb upstream 2.0kb upstream 16263   true scaffold_5: 15088982-15105244 Arabidopsis lyrata
AL5G30510 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 15103245-15105244 Arabidopsis lyrata
AL5G30510 2.0kb downstream 2.0kb downstream 16263   true scaffold_5: 15086982-15103244 Arabidopsis lyrata
AL5G30510 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 15086982-15088981 Arabidopsis lyrata
AL5G30510 5.0kb upstream 5.0kb upstream 19263   true scaffold_5: 15088982-15108244 Arabidopsis lyrata
AL5G30510 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 15103245-15108244 Arabidopsis lyrata
AL5G30510 5.0kb downstream 5.0kb downstream 19263   true scaffold_5: 15083982-15103244 Arabidopsis lyrata
AL5G30510 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 15083982-15088981 Arabidopsis lyrata
AL5G30510 10.0kb upstream 10.0kb upstream 24263   true scaffold_5: 15088982-15113244 Arabidopsis lyrata
AL5G30510 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 15103245-15113244 Arabidopsis lyrata
AL5G30510 10.0kb downstream 10.0kb downstream 24263   true scaffold_5: 15078982-15103244 Arabidopsis lyrata
AL5G30510 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 15078982-15088981 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360388 5261 Brassicaceae View MSA
123830490 5264 Brassicales-Malvales View MSA
124337349 5266 SBM View MSA
124238186 5268 Malvidae View MSA
124073517 5270 Rosid View MSA
123745544 5271 Pentapetalae View MSA
122793580 5272 Eudicot View MSA
122042840 5273 Angiosperm View MSA
121343832 5274 Embryophyte View MSA
123379927 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain