Gene : AL5G34250 A. lyrata v2.1

Defline:  (1 of 4) PTHR11064:SF27 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-2-RELATED Genomic Order:  2131
Name:  ? AL5G34250 Secondary Identifier:  ? PAC:35920219

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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G34250 0.5kb upstream 0.5kb upstream 2519   true scaffold_5: 16536364-16538882 Arabidopsis lyrata
AL5G34250 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 16538383-16538882 Arabidopsis lyrata
AL5G34250 0.5kb downstream 0.5kb downstream 2519   true scaffold_5: 16535864-16538382 Arabidopsis lyrata
AL5G34250 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 16535864-16536363 Arabidopsis lyrata
AL5G34250 1.0kb upstream 1.0kb upstream 3019   true scaffold_5: 16536364-16539382 Arabidopsis lyrata
AL5G34250 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 16538383-16539382 Arabidopsis lyrata
AL5G34250 1.0kb downstream 1.0kb downstream 3019   true scaffold_5: 16535364-16538382 Arabidopsis lyrata
AL5G34250 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 16535364-16536363 Arabidopsis lyrata
AL5G34250 2.0kb upstream 2.0kb upstream 4019   true scaffold_5: 16536364-16540382 Arabidopsis lyrata
AL5G34250 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 16538383-16540382 Arabidopsis lyrata
AL5G34250 2.0kb downstream 2.0kb downstream 4019   true scaffold_5: 16534364-16538382 Arabidopsis lyrata
AL5G34250 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 16534364-16536363 Arabidopsis lyrata
AL5G34250 5.0kb upstream 5.0kb upstream 7019   true scaffold_5: 16536364-16543382 Arabidopsis lyrata
AL5G34250 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 16538383-16543382 Arabidopsis lyrata
AL5G34250 5.0kb downstream 5.0kb downstream 7019   true scaffold_5: 16531364-16538382 Arabidopsis lyrata
AL5G34250 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 16531364-16536363 Arabidopsis lyrata
AL5G34250 10.0kb upstream 10.0kb upstream 12019   true scaffold_5: 16536364-16548382 Arabidopsis lyrata
AL5G34250 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 16538383-16548382 Arabidopsis lyrata
AL5G34250 10.0kb downstream 10.0kb downstream 12019   true scaffold_5: 16526364-16538382 Arabidopsis lyrata
AL5G34250 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 16526364-16536363 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374244 5261 Brassicaceae View MSA
123837518 5264 Brassicales-Malvales View MSA
124348681 5266 SBM View MSA
124247795 5268 Malvidae View MSA
124066236 5270 Rosid View MSA
123751737 5271 Pentapetalae View MSA
122797656 5272 Eudicot View MSA
122048596 5273 Angiosperm View MSA
123429094 5275 Viridiplantae View MSA
121350139 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain