Gene : AL5G34380 A. lyrata v2.1
Defline:  (1 of 1) KOG0131//KOG0144 - Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) Genomic Order:  2144
Name:  ? AL5G34380 Secondary Identifier:  ? PAC:35920675
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0 Pathways

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G34380 0.5kb upstream 0.5kb upstream 2735   true scaffold_5: 16595517-16598251 Arabidopsis lyrata
AL5G34380 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 16597752-16598251 Arabidopsis lyrata
AL5G34380 0.5kb downstream 0.5kb downstream 2735   true scaffold_5: 16595017-16597751 Arabidopsis lyrata
AL5G34380 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 16595017-16595516 Arabidopsis lyrata
AL5G34380 1.0kb upstream 1.0kb upstream 3235   true scaffold_5: 16595517-16598751 Arabidopsis lyrata
AL5G34380 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 16597752-16598751 Arabidopsis lyrata
AL5G34380 1.0kb downstream 1.0kb downstream 3235   true scaffold_5: 16594517-16597751 Arabidopsis lyrata
AL5G34380 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 16594517-16595516 Arabidopsis lyrata
AL5G34380 2.0kb upstream 2.0kb upstream 4235   true scaffold_5: 16595517-16599751 Arabidopsis lyrata
AL5G34380 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 16597752-16599751 Arabidopsis lyrata
AL5G34380 2.0kb downstream 2.0kb downstream 4235   true scaffold_5: 16593517-16597751 Arabidopsis lyrata
AL5G34380 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 16593517-16595516 Arabidopsis lyrata
AL5G34380 5.0kb upstream 5.0kb upstream 7235   true scaffold_5: 16595517-16602751 Arabidopsis lyrata
AL5G34380 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 16597752-16602751 Arabidopsis lyrata
AL5G34380 5.0kb downstream 5.0kb downstream 7235   true scaffold_5: 16590517-16597751 Arabidopsis lyrata
AL5G34380 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 16590517-16595516 Arabidopsis lyrata
AL5G34380 10.0kb upstream 10.0kb upstream 12235   true scaffold_5: 16595517-16607751 Arabidopsis lyrata
AL5G34380 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 16597752-16607751 Arabidopsis lyrata
AL5G34380 10.0kb downstream 10.0kb downstream 12235   true scaffold_5: 16585517-16597751 Arabidopsis lyrata
AL5G34380 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 16585517-16595516 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040882 5273 Angiosperm View MSA
122366081 5261 Brassicaceae View MSA
123799104 5264 Brassicales-Malvales View MSA
124296656 5266 SBM View MSA
124148746 5268 Malvidae View MSA
123874684 5270 Rosid View MSA
123739756 5271 Pentapetalae View MSA
122769963 5272 Eudicot View MSA
123429142 5275 Viridiplantae View MSA
121349812 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain