Gene : AL5G34170 A. lyrata v2.1

Defline:  (1 of 4) 4.3.1.24 - Phenylalanine ammonia-lyase Genomic Order:  2124
Name:  ? AL5G34170 Secondary Identifier:  ? PAC:35918167

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-1121 Arabidopsis lyrata pathologic  
Alyrata PWY1F-467 Arabidopsis lyrata pathologic  
Alyrata PWY-7186 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G34170 0.5kb upstream 0.5kb upstream 3167   true scaffold_5: 16505206-16508372 Arabidopsis lyrata
AL5G34170 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 16507873-16508372 Arabidopsis lyrata
AL5G34170 0.5kb downstream 0.5kb downstream 3167   true scaffold_5: 16504706-16507872 Arabidopsis lyrata
AL5G34170 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 16504706-16505205 Arabidopsis lyrata
AL5G34170 1.0kb upstream 1.0kb upstream 3667   true scaffold_5: 16505206-16508872 Arabidopsis lyrata
AL5G34170 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 16507873-16508872 Arabidopsis lyrata
AL5G34170 1.0kb downstream 1.0kb downstream 3667   true scaffold_5: 16504206-16507872 Arabidopsis lyrata
AL5G34170 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 16504206-16505205 Arabidopsis lyrata
AL5G34170 2.0kb upstream 2.0kb upstream 4667   true scaffold_5: 16505206-16509872 Arabidopsis lyrata
AL5G34170 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 16507873-16509872 Arabidopsis lyrata
AL5G34170 2.0kb downstream 2.0kb downstream 4667   true scaffold_5: 16503206-16507872 Arabidopsis lyrata
AL5G34170 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 16503206-16505205 Arabidopsis lyrata
AL5G34170 5.0kb upstream 5.0kb upstream 7667   true scaffold_5: 16505206-16512872 Arabidopsis lyrata
AL5G34170 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 16507873-16512872 Arabidopsis lyrata
AL5G34170 5.0kb downstream 5.0kb downstream 7667   true scaffold_5: 16500206-16507872 Arabidopsis lyrata
AL5G34170 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 16500206-16505205 Arabidopsis lyrata
AL5G34170 10.0kb upstream 10.0kb upstream 12667   true scaffold_5: 16505206-16517872 Arabidopsis lyrata
AL5G34170 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 16507873-16517872 Arabidopsis lyrata
AL5G34170 10.0kb downstream 10.0kb downstream 12667   true scaffold_5: 16495206-16507872 Arabidopsis lyrata
AL5G34170 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 16495206-16505205 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363433 5261 Brassicaceae View MSA
123839790 5264 Brassicales-Malvales View MSA
124346801 5266 SBM View MSA
124254509 5268 Malvidae View MSA
124070450 5270 Rosid View MSA
123747775 5271 Pentapetalae View MSA
122795347 5272 Eudicot View MSA
122043246 5273 Angiosperm View MSA
121351477 5274 Embryophyte View MSA
123382181 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain