Gene : AL5G36480 A. lyrata v2.1
Defline:  (1 of 1) KOG0121//KOG0131//KOG0148//KOG4210 - Nuclear cap-binding protein complex, subunit CBP20 (RRM superfamily) // Splicing factor 3b, subunit 4 // Apoptosis-promoting RNA-binding protein TIA-1/TIAR (RRM superfamily) // Nuclear localization sequence binding protein Genomic Order:  2349
Name:  ? AL5G36480 Secondary Identifier:  ? PAC:35920082
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G36480 0.5kb upstream 0.5kb upstream 3329   true scaffold_5: 17452533-17455861 Arabidopsis lyrata
AL5G36480 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 17452533-17453032 Arabidopsis lyrata
AL5G36480 0.5kb downstream 0.5kb downstream 3329   true scaffold_5: 17453033-17456361 Arabidopsis lyrata
AL5G36480 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 17455862-17456361 Arabidopsis lyrata
AL5G36480 1.0kb upstream 1.0kb upstream 3829   true scaffold_5: 17452033-17455861 Arabidopsis lyrata
AL5G36480 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 17452033-17453032 Arabidopsis lyrata
AL5G36480 1.0kb downstream 1.0kb downstream 3829   true scaffold_5: 17453033-17456861 Arabidopsis lyrata
AL5G36480 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 17455862-17456861 Arabidopsis lyrata
AL5G36480 2.0kb upstream 2.0kb upstream 4829   true scaffold_5: 17451033-17455861 Arabidopsis lyrata
AL5G36480 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 17451033-17453032 Arabidopsis lyrata
AL5G36480 2.0kb downstream 2.0kb downstream 4829   true scaffold_5: 17453033-17457861 Arabidopsis lyrata
AL5G36480 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 17455862-17457861 Arabidopsis lyrata
AL5G36480 5.0kb upstream 5.0kb upstream 7829   true scaffold_5: 17448033-17455861 Arabidopsis lyrata
AL5G36480 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 17448033-17453032 Arabidopsis lyrata
AL5G36480 5.0kb downstream 5.0kb downstream 7829   true scaffold_5: 17453033-17460861 Arabidopsis lyrata
AL5G36480 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 17455862-17460861 Arabidopsis lyrata
AL5G36480 10.0kb upstream 10.0kb upstream 12829   true scaffold_5: 17443033-17455861 Arabidopsis lyrata
AL5G36480 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 17443033-17453032 Arabidopsis lyrata
AL5G36480 10.0kb downstream 10.0kb downstream 12829   true scaffold_5: 17453033-17465861 Arabidopsis lyrata
AL5G36480 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 17455862-17465861 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376130 5261 Brassicaceae View MSA
123836538 5264 Brassicales-Malvales View MSA
124348725 5266 SBM View MSA
124243960 5268 Malvidae View MSA
124069375 5270 Rosid View MSA
123748314 5271 Pentapetalae View MSA
122791065 5272 Eudicot View MSA
122048889 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121348554 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain