Gene : AL5G35770 A. lyrata v2.1

Defline:  (1 of 1) 5.3.1.13 - Arabinose-5-phosphate isomerase / Phosphoarabinoisomerase Genomic Order:  2278
Name:  ? AL5G35770 Secondary Identifier:  ? PAC:35920312

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-1269 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G35770 0.5kb upstream 0.5kb upstream 2124   true scaffold_5: 17117325-17119448 Arabidopsis lyrata
AL5G35770 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 17117325-17117824 Arabidopsis lyrata
AL5G35770 0.5kb downstream 0.5kb downstream 2124   true scaffold_5: 17117825-17119948 Arabidopsis lyrata
AL5G35770 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 17119449-17119948 Arabidopsis lyrata
AL5G35770 1.0kb upstream 1.0kb upstream 2624   true scaffold_5: 17116825-17119448 Arabidopsis lyrata
AL5G35770 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 17116825-17117824 Arabidopsis lyrata
AL5G35770 1.0kb downstream 1.0kb downstream 2624   true scaffold_5: 17117825-17120448 Arabidopsis lyrata
AL5G35770 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 17119449-17120448 Arabidopsis lyrata
AL5G35770 2.0kb upstream 2.0kb upstream 3624   true scaffold_5: 17115825-17119448 Arabidopsis lyrata
AL5G35770 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 17115825-17117824 Arabidopsis lyrata
AL5G35770 2.0kb downstream 2.0kb downstream 3624   true scaffold_5: 17117825-17121448 Arabidopsis lyrata
AL5G35770 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 17119449-17121448 Arabidopsis lyrata
AL5G35770 5.0kb upstream 5.0kb upstream 6624   true scaffold_5: 17112825-17119448 Arabidopsis lyrata
AL5G35770 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 17112825-17117824 Arabidopsis lyrata
AL5G35770 5.0kb downstream 5.0kb downstream 6624   true scaffold_5: 17117825-17124448 Arabidopsis lyrata
AL5G35770 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 17119449-17124448 Arabidopsis lyrata
AL5G35770 10.0kb upstream 10.0kb upstream 11624   true scaffold_5: 17107825-17119448 Arabidopsis lyrata
AL5G35770 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 17107825-17117824 Arabidopsis lyrata
AL5G35770 10.0kb downstream 10.0kb downstream 11624   true scaffold_5: 17117825-17129448 Arabidopsis lyrata
AL5G35770 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 17119449-17129448 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041154 5273 Angiosperm View MSA
122370553 5261 Brassicaceae View MSA
123839402 5264 Brassicales-Malvales View MSA
124350596 5266 SBM View MSA
124238652 5268 Malvidae View MSA
124065763 5270 Rosid View MSA
123738105 5271 Pentapetalae View MSA
122788846 5272 Eudicot View MSA
121347729 5274 Embryophyte View MSA
123423941 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain