Gene : AL5G35870 A. lyrata v2.1

Defline:  (1 of 1) PTHR23315:SF119 - U-BOX DOMAIN-CONTAINING PROTEIN 3 Genomic Order:  2287
Name:  ? AL5G35870 Secondary Identifier:  ? PAC:35918970

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-7511 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G35870 0.5kb upstream 0.5kb upstream 3974   true scaffold_5: 17160017-17163990 Arabidopsis lyrata
AL5G35870 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 17163491-17163990 Arabidopsis lyrata
AL5G35870 0.5kb downstream 0.5kb downstream 3974   true scaffold_5: 17159517-17163490 Arabidopsis lyrata
AL5G35870 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 17159517-17160016 Arabidopsis lyrata
AL5G35870 1.0kb upstream 1.0kb upstream 4474   true scaffold_5: 17160017-17164490 Arabidopsis lyrata
AL5G35870 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 17163491-17164490 Arabidopsis lyrata
AL5G35870 1.0kb downstream 1.0kb downstream 4474   true scaffold_5: 17159017-17163490 Arabidopsis lyrata
AL5G35870 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 17159017-17160016 Arabidopsis lyrata
AL5G35870 2.0kb upstream 2.0kb upstream 5474   true scaffold_5: 17160017-17165490 Arabidopsis lyrata
AL5G35870 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 17163491-17165490 Arabidopsis lyrata
AL5G35870 2.0kb downstream 2.0kb downstream 5474   true scaffold_5: 17158017-17163490 Arabidopsis lyrata
AL5G35870 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 17158017-17160016 Arabidopsis lyrata
AL5G35870 5.0kb upstream 5.0kb upstream 8474   true scaffold_5: 17160017-17168490 Arabidopsis lyrata
AL5G35870 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 17163491-17168490 Arabidopsis lyrata
AL5G35870 5.0kb downstream 5.0kb downstream 8474   true scaffold_5: 17155017-17163490 Arabidopsis lyrata
AL5G35870 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 17155017-17160016 Arabidopsis lyrata
AL5G35870 10.0kb upstream 10.0kb upstream 13474   true scaffold_5: 17160017-17173490 Arabidopsis lyrata
AL5G35870 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 17163491-17173490 Arabidopsis lyrata
AL5G35870 10.0kb downstream 10.0kb downstream 13474   true scaffold_5: 17150017-17163490 Arabidopsis lyrata
AL5G35870 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 17150017-17160016 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372135 5261 Brassicaceae View MSA
123829079 5264 Brassicales-Malvales View MSA
124344336 5266 SBM View MSA
124243678 5268 Malvidae View MSA
124067773 5270 Rosid View MSA
123748124 5271 Pentapetalae View MSA
122789337 5272 Eudicot View MSA
122048814 5273 Angiosperm View MSA
121345933 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain