Gene : AL5G35520 A. lyrata v2.1

Defline:  (1 of 1) K13421 - uridine monophosphate synthetase (UMPS) Genomic Order:  2253
Name:  ? AL5G35520 Secondary Identifier:  ? PAC:35918379

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY0-162 Arabidopsis lyrata pathologic  
Alyrata PWY-5686 Arabidopsis lyrata pathologic  
Alyrata PWY-7211 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G35520 0.5kb upstream 0.5kb upstream 2678   true scaffold_5: 17035836-17038513 Arabidopsis lyrata
AL5G35520 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 17038014-17038513 Arabidopsis lyrata
AL5G35520 0.5kb downstream 0.5kb downstream 2678   true scaffold_5: 17035336-17038013 Arabidopsis lyrata
AL5G35520 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 17035336-17035835 Arabidopsis lyrata
AL5G35520 1.0kb upstream 1.0kb upstream 3178   true scaffold_5: 17035836-17039013 Arabidopsis lyrata
AL5G35520 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 17038014-17039013 Arabidopsis lyrata
AL5G35520 1.0kb downstream 1.0kb downstream 3178   true scaffold_5: 17034836-17038013 Arabidopsis lyrata
AL5G35520 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 17034836-17035835 Arabidopsis lyrata
AL5G35520 2.0kb upstream 2.0kb upstream 4178   true scaffold_5: 17035836-17040013 Arabidopsis lyrata
AL5G35520 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 17038014-17040013 Arabidopsis lyrata
AL5G35520 2.0kb downstream 2.0kb downstream 4178   true scaffold_5: 17033836-17038013 Arabidopsis lyrata
AL5G35520 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 17033836-17035835 Arabidopsis lyrata
AL5G35520 5.0kb upstream 5.0kb upstream 7178   true scaffold_5: 17035836-17043013 Arabidopsis lyrata
AL5G35520 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 17038014-17043013 Arabidopsis lyrata
AL5G35520 5.0kb downstream 5.0kb downstream 7178   true scaffold_5: 17030836-17038013 Arabidopsis lyrata
AL5G35520 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 17030836-17035835 Arabidopsis lyrata
AL5G35520 10.0kb upstream 10.0kb upstream 12178   true scaffold_5: 17035836-17048013 Arabidopsis lyrata
AL5G35520 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 17038014-17048013 Arabidopsis lyrata
AL5G35520 10.0kb downstream 10.0kb downstream 12178   true scaffold_5: 17025836-17038013 Arabidopsis lyrata
AL5G35520 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 17025836-17035835 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374061 5261 Brassicaceae View MSA
123840006 5264 Brassicales-Malvales View MSA
124338602 5266 SBM View MSA
124250162 5268 Malvidae View MSA
124060638 5270 Rosid View MSA
123751852 5271 Pentapetalae View MSA
122789079 5272 Eudicot View MSA
122042153 5273 Angiosperm View MSA
121351237 5274 Embryophyte View MSA
123424950 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain