Gene : AL5G38900 A. lyrata v2.1
Defline:  (1 of 2) K15326 - tRNA-splicing endonuclease subunit Sen54 (TSEN54) Genomic Order:  2581
Name:  ? AL5G38900 Secondary Identifier:  ? PAC:35918637
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G38900 0.5kb upstream 0.5kb upstream 1913   true scaffold_5: 18354824-18356736 Arabidopsis lyrata
AL5G38900 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 18354824-18355323 Arabidopsis lyrata
AL5G38900 0.5kb downstream 0.5kb downstream 1913   true scaffold_5: 18355324-18357236 Arabidopsis lyrata
AL5G38900 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 18356737-18357236 Arabidopsis lyrata
AL5G38900 1.0kb upstream 1.0kb upstream 2413   true scaffold_5: 18354324-18356736 Arabidopsis lyrata
AL5G38900 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 18354324-18355323 Arabidopsis lyrata
AL5G38900 1.0kb downstream 1.0kb downstream 2413   true scaffold_5: 18355324-18357736 Arabidopsis lyrata
AL5G38900 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 18356737-18357736 Arabidopsis lyrata
AL5G38900 2.0kb upstream 2.0kb upstream 3413   true scaffold_5: 18353324-18356736 Arabidopsis lyrata
AL5G38900 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 18353324-18355323 Arabidopsis lyrata
AL5G38900 2.0kb downstream 2.0kb downstream 3413   true scaffold_5: 18355324-18358736 Arabidopsis lyrata
AL5G38900 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 18356737-18358736 Arabidopsis lyrata
AL5G38900 5.0kb upstream 5.0kb upstream 6413   true scaffold_5: 18350324-18356736 Arabidopsis lyrata
AL5G38900 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 18350324-18355323 Arabidopsis lyrata
AL5G38900 5.0kb downstream 5.0kb downstream 6413   true scaffold_5: 18355324-18361736 Arabidopsis lyrata
AL5G38900 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 18356737-18361736 Arabidopsis lyrata
AL5G38900 10.0kb upstream 10.0kb upstream 11413   true scaffold_5: 18345324-18356736 Arabidopsis lyrata
AL5G38900 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 18345324-18355323 Arabidopsis lyrata
AL5G38900 10.0kb downstream 10.0kb downstream 11413   true scaffold_5: 18355324-18366736 Arabidopsis lyrata
AL5G38900 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 18356737-18366736 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360874 5261 Brassicaceae View MSA
123839324 5264 Brassicales-Malvales View MSA
124351445 5266 SBM View MSA
124243740 5268 Malvidae View MSA
124066915 5270 Rosid View MSA
123737661 5271 Pentapetalae View MSA
122790630 5272 Eudicot View MSA
122051332 5273 Angiosperm View MSA
121351548 5274 Embryophyte View MSA
123382220 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain