Gene : AL5G39000 A. lyrata v2.1
Defline:  (1 of 59) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  2588
Name:  ? AL5G39000 Secondary Identifier:  ? PAC:35921130
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G39000 0.5kb upstream 0.5kb upstream 3259   true scaffold_5: 18406731-18409989 Arabidopsis lyrata
AL5G39000 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 18409490-18409989 Arabidopsis lyrata
AL5G39000 0.5kb downstream 0.5kb downstream 3259   true scaffold_5: 18406231-18409489 Arabidopsis lyrata
AL5G39000 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 18406231-18406730 Arabidopsis lyrata
AL5G39000 1.0kb upstream 1.0kb upstream 3759   true scaffold_5: 18406731-18410489 Arabidopsis lyrata
AL5G39000 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 18409490-18410489 Arabidopsis lyrata
AL5G39000 1.0kb downstream 1.0kb downstream 3759   true scaffold_5: 18405731-18409489 Arabidopsis lyrata
AL5G39000 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 18405731-18406730 Arabidopsis lyrata
AL5G39000 2.0kb upstream 2.0kb upstream 4759   true scaffold_5: 18406731-18411489 Arabidopsis lyrata
AL5G39000 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 18409490-18411489 Arabidopsis lyrata
AL5G39000 2.0kb downstream 2.0kb downstream 4759   true scaffold_5: 18404731-18409489 Arabidopsis lyrata
AL5G39000 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 18404731-18406730 Arabidopsis lyrata
AL5G39000 5.0kb upstream 5.0kb upstream 7759   true scaffold_5: 18406731-18414489 Arabidopsis lyrata
AL5G39000 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 18409490-18414489 Arabidopsis lyrata
AL5G39000 5.0kb downstream 5.0kb downstream 7759   true scaffold_5: 18401731-18409489 Arabidopsis lyrata
AL5G39000 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 18401731-18406730 Arabidopsis lyrata
AL5G39000 10.0kb upstream 10.0kb upstream 12759   true scaffold_5: 18406731-18419489 Arabidopsis lyrata
AL5G39000 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 18409490-18419489 Arabidopsis lyrata
AL5G39000 10.0kb downstream 10.0kb downstream 12759   true scaffold_5: 18396731-18409489 Arabidopsis lyrata
AL5G39000 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 18396731-18406730 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366441 5261 Brassicaceae View MSA
123834289 5264 Brassicales-Malvales View MSA
124345164 5266 SBM View MSA
124241999 5268 Malvidae View MSA
124067797 5270 Rosid View MSA
123744746 5271 Pentapetalae View MSA
122794994 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain