Gene : AL5G39140 A. lyrata v2.1

Defline:  (1 of 1) 2.7.2.8 - Acetylglutamate kinase Genomic Order:  2602
Name:  ? AL5G39140 Secondary Identifier:  ? PAC:35920501

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata ARGSYNBSUB-PWY Arabidopsis lyrata pathologic  
Alyrata ARGSYN-PWY Arabidopsis lyrata pathologic  
Alyrata GLUTORN-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G39140 0.5kb upstream 0.5kb upstream 1894   true scaffold_5: 18469276-18471169 Arabidopsis lyrata
AL5G39140 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 18470670-18471169 Arabidopsis lyrata
AL5G39140 0.5kb downstream 0.5kb downstream 1894   true scaffold_5: 18468776-18470669 Arabidopsis lyrata
AL5G39140 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 18468776-18469275 Arabidopsis lyrata
AL5G39140 1.0kb upstream 1.0kb upstream 2394   true scaffold_5: 18469276-18471669 Arabidopsis lyrata
AL5G39140 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 18470670-18471669 Arabidopsis lyrata
AL5G39140 1.0kb downstream 1.0kb downstream 2394   true scaffold_5: 18468276-18470669 Arabidopsis lyrata
AL5G39140 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 18468276-18469275 Arabidopsis lyrata
AL5G39140 2.0kb upstream 2.0kb upstream 3394   true scaffold_5: 18469276-18472669 Arabidopsis lyrata
AL5G39140 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 18470670-18472669 Arabidopsis lyrata
AL5G39140 2.0kb downstream 2.0kb downstream 3394   true scaffold_5: 18467276-18470669 Arabidopsis lyrata
AL5G39140 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 18467276-18469275 Arabidopsis lyrata
AL5G39140 5.0kb upstream 5.0kb upstream 6394   true scaffold_5: 18469276-18475669 Arabidopsis lyrata
AL5G39140 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 18470670-18475669 Arabidopsis lyrata
AL5G39140 5.0kb downstream 5.0kb downstream 6394   true scaffold_5: 18464276-18470669 Arabidopsis lyrata
AL5G39140 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 18464276-18469275 Arabidopsis lyrata
AL5G39140 10.0kb upstream 10.0kb upstream 11394   true scaffold_5: 18469276-18480669 Arabidopsis lyrata
AL5G39140 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 18470670-18480669 Arabidopsis lyrata
AL5G39140 10.0kb downstream 10.0kb downstream 11394   true scaffold_5: 18459276-18470669 Arabidopsis lyrata
AL5G39140 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 18459276-18469275 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368103 5261 Brassicaceae View MSA
123834748 5264 Brassicales-Malvales View MSA
124350403 5266 SBM View MSA
124250749 5268 Malvidae View MSA
124062864 5270 Rosid View MSA
123739875 5271 Pentapetalae View MSA
122792416 5272 Eudicot View MSA
122045485 5273 Angiosperm View MSA
121347525 5274 Embryophyte View MSA
123424020 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain