Gene : AL5G38620 A. lyrata v2.1

Defline:  (1 of 2) K14674 - TAG lipase / steryl ester hydrolase / phospholipase A2 / LPA acyltransferase (TGL4) Genomic Order:  2553
Name:  ? AL5G38620 Secondary Identifier:  ? PAC:35918614

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata LIPAS-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G38620 0.5kb upstream 0.5kb upstream 3637   true scaffold_5: 18268100-18271736 Arabidopsis lyrata
AL5G38620 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 18271237-18271736 Arabidopsis lyrata
AL5G38620 0.5kb downstream 0.5kb downstream 3637   true scaffold_5: 18267600-18271236 Arabidopsis lyrata
AL5G38620 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 18267600-18268099 Arabidopsis lyrata
AL5G38620 1.0kb upstream 1.0kb upstream 4137   true scaffold_5: 18268100-18272236 Arabidopsis lyrata
AL5G38620 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 18271237-18272236 Arabidopsis lyrata
AL5G38620 1.0kb downstream 1.0kb downstream 4137   true scaffold_5: 18267100-18271236 Arabidopsis lyrata
AL5G38620 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 18267100-18268099 Arabidopsis lyrata
AL5G38620 2.0kb upstream 2.0kb upstream 5137   true scaffold_5: 18268100-18273236 Arabidopsis lyrata
AL5G38620 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 18271237-18273236 Arabidopsis lyrata
AL5G38620 2.0kb downstream 2.0kb downstream 5137   true scaffold_5: 18266100-18271236 Arabidopsis lyrata
AL5G38620 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 18266100-18268099 Arabidopsis lyrata
AL5G38620 5.0kb upstream 5.0kb upstream 8137   true scaffold_5: 18268100-18276236 Arabidopsis lyrata
AL5G38620 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 18271237-18276236 Arabidopsis lyrata
AL5G38620 5.0kb downstream 5.0kb downstream 8137   true scaffold_5: 18263100-18271236 Arabidopsis lyrata
AL5G38620 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 18263100-18268099 Arabidopsis lyrata
AL5G38620 10.0kb upstream 10.0kb upstream 13137   true scaffold_5: 18268100-18281236 Arabidopsis lyrata
AL5G38620 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 18271237-18281236 Arabidopsis lyrata
AL5G38620 10.0kb downstream 10.0kb downstream 13137   true scaffold_5: 18258100-18271236 Arabidopsis lyrata
AL5G38620 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 18258100-18268099 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511051 5273 Angiosperm View MSA
122371600 5261 Brassicaceae View MSA
123800196 5264 Brassicales-Malvales View MSA
124297640 5266 SBM View MSA
124149474 5268 Malvidae View MSA
123875278 5270 Rosid View MSA
123459129 5271 Pentapetalae View MSA
122494524 5272 Eudicot View MSA
120784119 5274 Embryophyte View MSA
122826054 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain