Gene : AL5G38540 A. lyrata v2.1
Defline:  (1 of 1) K06677 - condensin complex subunit 1 (YCS4, CNAP1, CAPD2) Genomic Order:  2545
Name:  ? AL5G38540 Secondary Identifier:  ? PAC:35921404
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G38540 0.5kb upstream 0.5kb upstream 6656   true scaffold_5: 18221251-18227906 Arabidopsis lyrata
AL5G38540 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 18227407-18227906 Arabidopsis lyrata
AL5G38540 0.5kb downstream 0.5kb downstream 6656   true scaffold_5: 18220751-18227406 Arabidopsis lyrata
AL5G38540 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 18220751-18221250 Arabidopsis lyrata
AL5G38540 1.0kb upstream 1.0kb upstream 7156   true scaffold_5: 18221251-18228406 Arabidopsis lyrata
AL5G38540 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 18227407-18228406 Arabidopsis lyrata
AL5G38540 1.0kb downstream 1.0kb downstream 7156   true scaffold_5: 18220251-18227406 Arabidopsis lyrata
AL5G38540 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 18220251-18221250 Arabidopsis lyrata
AL5G38540 2.0kb upstream 2.0kb upstream 8156   true scaffold_5: 18221251-18229406 Arabidopsis lyrata
AL5G38540 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 18227407-18229406 Arabidopsis lyrata
AL5G38540 2.0kb downstream 2.0kb downstream 8156   true scaffold_5: 18219251-18227406 Arabidopsis lyrata
AL5G38540 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 18219251-18221250 Arabidopsis lyrata
AL5G38540 5.0kb upstream 5.0kb upstream 11156   true scaffold_5: 18221251-18232406 Arabidopsis lyrata
AL5G38540 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 18227407-18232406 Arabidopsis lyrata
AL5G38540 5.0kb downstream 5.0kb downstream 11156   true scaffold_5: 18216251-18227406 Arabidopsis lyrata
AL5G38540 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 18216251-18221250 Arabidopsis lyrata
AL5G38540 10.0kb upstream 10.0kb upstream 16156   true scaffold_5: 18221251-18237406 Arabidopsis lyrata
AL5G38540 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 18227407-18237406 Arabidopsis lyrata
AL5G38540 10.0kb downstream 10.0kb downstream 16156   true scaffold_5: 18211251-18227406 Arabidopsis lyrata
AL5G38540 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 18211251-18221250 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362767 5261 Brassicaceae View MSA
123834340 5264 Brassicales-Malvales View MSA
124342971 5266 SBM View MSA
124241005 5268 Malvidae View MSA
124061562 5270 Rosid View MSA
123737638 5271 Pentapetalae View MSA
122792109 5272 Eudicot View MSA
122042219 5273 Angiosperm View MSA
121346287 5274 Embryophyte View MSA
123424305 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain