Gene : AL5G37970 A. lyrata v2.1

Defline:  (1 of 2) PTHR15245:SF23 - PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 1-RELATED Genomic Order:  2491
Name:  ? AL5G37970 Secondary Identifier:  ? PAC:35920943

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-6351 Arabidopsis lyrata pathologic  
Alyrata PWY-6352 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G37970 0.5kb upstream 0.5kb upstream 3030   true scaffold_5: 17992392-17995421 Arabidopsis lyrata
AL5G37970 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 17992392-17992891 Arabidopsis lyrata
AL5G37970 0.5kb downstream 0.5kb downstream 3030   true scaffold_5: 17992892-17995921 Arabidopsis lyrata
AL5G37970 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 17995422-17995921 Arabidopsis lyrata
AL5G37970 1.0kb upstream 1.0kb upstream 3530   true scaffold_5: 17991892-17995421 Arabidopsis lyrata
AL5G37970 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 17991892-17992891 Arabidopsis lyrata
AL5G37970 1.0kb downstream 1.0kb downstream 3530   true scaffold_5: 17992892-17996421 Arabidopsis lyrata
AL5G37970 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 17995422-17996421 Arabidopsis lyrata
AL5G37970 2.0kb upstream 2.0kb upstream 4530   true scaffold_5: 17990892-17995421 Arabidopsis lyrata
AL5G37970 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 17990892-17992891 Arabidopsis lyrata
AL5G37970 2.0kb downstream 2.0kb downstream 4530   true scaffold_5: 17992892-17997421 Arabidopsis lyrata
AL5G37970 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 17995422-17997421 Arabidopsis lyrata
AL5G37970 5.0kb upstream 5.0kb upstream 7530   true scaffold_5: 17987892-17995421 Arabidopsis lyrata
AL5G37970 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 17987892-17992891 Arabidopsis lyrata
AL5G37970 5.0kb downstream 5.0kb downstream 7530   true scaffold_5: 17992892-18000421 Arabidopsis lyrata
AL5G37970 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 17995422-18000421 Arabidopsis lyrata
AL5G37970 10.0kb upstream 10.0kb upstream 12530   true scaffold_5: 17982892-17995421 Arabidopsis lyrata
AL5G37970 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 17982892-17992891 Arabidopsis lyrata
AL5G37970 10.0kb downstream 10.0kb downstream 12530   true scaffold_5: 17992892-18005421 Arabidopsis lyrata
AL5G37970 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 17995422-18005421 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028211 5273 Angiosperm View MSA
122363835 5261 Brassicaceae View MSA
123798625 5264 Brassicales-Malvales View MSA
124350299 5266 SBM View MSA
124236907 5268 Malvidae View MSA
124066276 5270 Rosid View MSA
123740399 5271 Pentapetalae View MSA
122769978 5272 Eudicot View MSA
123429040 5275 Viridiplantae View MSA
121297732 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain