Gene : AL5G37950 A. lyrata v2.1

Defline:  (1 of 3) PTHR22763:SF44 - E3 UBIQUITIN LIGASE Genomic Order:  2489
Name:  ? AL5G37950 Secondary Identifier:  ? PAC:35918929

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-7511 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G37950 0.5kb upstream 0.5kb upstream 2633   true scaffold_5: 17983733-17986365 Arabidopsis lyrata
AL5G37950 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 17983733-17984232 Arabidopsis lyrata
AL5G37950 0.5kb downstream 0.5kb downstream 2633   true scaffold_5: 17984233-17986865 Arabidopsis lyrata
AL5G37950 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 17986366-17986865 Arabidopsis lyrata
AL5G37950 1.0kb upstream 1.0kb upstream 3133   true scaffold_5: 17983233-17986365 Arabidopsis lyrata
AL5G37950 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 17983233-17984232 Arabidopsis lyrata
AL5G37950 1.0kb downstream 1.0kb downstream 3133   true scaffold_5: 17984233-17987365 Arabidopsis lyrata
AL5G37950 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 17986366-17987365 Arabidopsis lyrata
AL5G37950 2.0kb upstream 2.0kb upstream 4133   true scaffold_5: 17982233-17986365 Arabidopsis lyrata
AL5G37950 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 17982233-17984232 Arabidopsis lyrata
AL5G37950 2.0kb downstream 2.0kb downstream 4133   true scaffold_5: 17984233-17988365 Arabidopsis lyrata
AL5G37950 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 17986366-17988365 Arabidopsis lyrata
AL5G37950 5.0kb upstream 5.0kb upstream 7133   true scaffold_5: 17979233-17986365 Arabidopsis lyrata
AL5G37950 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 17979233-17984232 Arabidopsis lyrata
AL5G37950 5.0kb downstream 5.0kb downstream 7133   true scaffold_5: 17984233-17991365 Arabidopsis lyrata
AL5G37950 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 17986366-17991365 Arabidopsis lyrata
AL5G37950 10.0kb upstream 10.0kb upstream 12133   true scaffold_5: 17974233-17986365 Arabidopsis lyrata
AL5G37950 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 17974233-17984232 Arabidopsis lyrata
AL5G37950 10.0kb downstream 10.0kb downstream 12133   true scaffold_5: 17984233-17996365 Arabidopsis lyrata
AL5G37950 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 17986366-17996365 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510946 5273 Angiosperm View MSA
122370194 5261 Brassicaceae View MSA
123799914 5264 Brassicales-Malvales View MSA
124297384 5266 SBM View MSA
124149293 5268 Malvidae View MSA
123875128 5270 Rosid View MSA
123459003 5271 Pentapetalae View MSA
122494399 5272 Eudicot View MSA
123429130 5275 Viridiplantae View MSA
121349521 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain