Gene : AL5G41180 A. lyrata v2.1
Defline:  (1 of 1) PTHR13343:SF18 - PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN-LIKE PROTEIN Genomic Order:  2798
Name:  ? AL5G41180 Secondary Identifier:  ? PAC:35920494
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G41180 0.5kb upstream 0.5kb upstream 4125   true scaffold_5: 19284768-19288892 Arabidopsis lyrata
AL5G41180 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 19284768-19285267 Arabidopsis lyrata
AL5G41180 0.5kb downstream 0.5kb downstream 4125   true scaffold_5: 19285268-19289392 Arabidopsis lyrata
AL5G41180 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 19288893-19289392 Arabidopsis lyrata
AL5G41180 1.0kb upstream 1.0kb upstream 4625   true scaffold_5: 19284268-19288892 Arabidopsis lyrata
AL5G41180 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 19284268-19285267 Arabidopsis lyrata
AL5G41180 1.0kb downstream 1.0kb downstream 4625   true scaffold_5: 19285268-19289892 Arabidopsis lyrata
AL5G41180 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 19288893-19289892 Arabidopsis lyrata
AL5G41180 2.0kb upstream 2.0kb upstream 5625   true scaffold_5: 19283268-19288892 Arabidopsis lyrata
AL5G41180 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 19283268-19285267 Arabidopsis lyrata
AL5G41180 2.0kb downstream 2.0kb downstream 5625   true scaffold_5: 19285268-19290892 Arabidopsis lyrata
AL5G41180 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 19288893-19290892 Arabidopsis lyrata
AL5G41180 5.0kb upstream 5.0kb upstream 8625   true scaffold_5: 19280268-19288892 Arabidopsis lyrata
AL5G41180 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 19280268-19285267 Arabidopsis lyrata
AL5G41180 5.0kb downstream 5.0kb downstream 8625   true scaffold_5: 19285268-19293892 Arabidopsis lyrata
AL5G41180 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 19288893-19293892 Arabidopsis lyrata
AL5G41180 10.0kb upstream 10.0kb upstream 13625   true scaffold_5: 19275268-19288892 Arabidopsis lyrata
AL5G41180 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 19275268-19285267 Arabidopsis lyrata
AL5G41180 10.0kb downstream 10.0kb downstream 13625   true scaffold_5: 19285268-19298892 Arabidopsis lyrata
AL5G41180 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 19288893-19298892 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362046 5261 Brassicaceae View MSA
123832420 5264 Brassicales-Malvales View MSA
124321797 5266 SBM View MSA
124247203 5268 Malvidae View MSA
124068606 5270 Rosid View MSA
123738942 5271 Pentapetalae View MSA
122769938 5272 Eudicot View MSA
122050575 5273 Angiosperm View MSA
121348228 5274 Embryophyte View MSA
123380781 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain