Gene : AL5G40560 A. lyrata v2.1
Defline:  (1 of 2) PTHR11945:SF150 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL1-RELATED Genomic Order:  2738
Name:  ? AL5G40560 Secondary Identifier:  ? PAC:35920711
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G40560 0.5kb upstream 0.5kb upstream 4973   true scaffold_5: 19027400-19032372 Arabidopsis lyrata
AL5G40560 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 19027400-19027899 Arabidopsis lyrata
AL5G40560 0.5kb downstream 0.5kb downstream 4973   true scaffold_5: 19027900-19032872 Arabidopsis lyrata
AL5G40560 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 19032373-19032872 Arabidopsis lyrata
AL5G40560 1.0kb upstream 1.0kb upstream 5473   true scaffold_5: 19026900-19032372 Arabidopsis lyrata
AL5G40560 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 19026900-19027899 Arabidopsis lyrata
AL5G40560 1.0kb downstream 1.0kb downstream 5473   true scaffold_5: 19027900-19033372 Arabidopsis lyrata
AL5G40560 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 19032373-19033372 Arabidopsis lyrata
AL5G40560 2.0kb upstream 2.0kb upstream 6473   true scaffold_5: 19025900-19032372 Arabidopsis lyrata
AL5G40560 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 19025900-19027899 Arabidopsis lyrata
AL5G40560 2.0kb downstream 2.0kb downstream 6473   true scaffold_5: 19027900-19034372 Arabidopsis lyrata
AL5G40560 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 19032373-19034372 Arabidopsis lyrata
AL5G40560 5.0kb upstream 5.0kb upstream 9473   true scaffold_5: 19022900-19032372 Arabidopsis lyrata
AL5G40560 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 19022900-19027899 Arabidopsis lyrata
AL5G40560 5.0kb downstream 5.0kb downstream 9473   true scaffold_5: 19027900-19037372 Arabidopsis lyrata
AL5G40560 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 19032373-19037372 Arabidopsis lyrata
AL5G40560 10.0kb upstream 10.0kb upstream 14473   true scaffold_5: 19017900-19032372 Arabidopsis lyrata
AL5G40560 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 19017900-19027899 Arabidopsis lyrata
AL5G40560 10.0kb downstream 10.0kb downstream 14473   true scaffold_5: 19027900-19042372 Arabidopsis lyrata
AL5G40560 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 19032373-19042372 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364573 5261 Brassicaceae View MSA
123838020 5264 Brassicales-Malvales View MSA
124349939 5266 SBM View MSA
124253433 5268 Malvidae View MSA
124063483 5270 Rosid View MSA
123747867 5271 Pentapetalae View MSA
122793842 5272 Eudicot View MSA
122049629 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain