Gene : AL5G40200 A. lyrata v2.1
Defline:  (1 of 89) KOG1987 - Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains Genomic Order:  2703
Name:  ? AL5G40200 Secondary Identifier:  ? PAC:35921406
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G40200 0.5kb upstream 0.5kb upstream 2652   true scaffold_5: 18882824-18885475 Arabidopsis lyrata
AL5G40200 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 18884976-18885475 Arabidopsis lyrata
AL5G40200 0.5kb downstream 0.5kb downstream 2652   true scaffold_5: 18882324-18884975 Arabidopsis lyrata
AL5G40200 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 18882324-18882823 Arabidopsis lyrata
AL5G40200 1.0kb upstream 1.0kb upstream 3152   true scaffold_5: 18882824-18885975 Arabidopsis lyrata
AL5G40200 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 18884976-18885975 Arabidopsis lyrata
AL5G40200 1.0kb downstream 1.0kb downstream 3152   true scaffold_5: 18881824-18884975 Arabidopsis lyrata
AL5G40200 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 18881824-18882823 Arabidopsis lyrata
AL5G40200 2.0kb upstream 2.0kb upstream 4152   true scaffold_5: 18882824-18886975 Arabidopsis lyrata
AL5G40200 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 18884976-18886975 Arabidopsis lyrata
AL5G40200 2.0kb downstream 2.0kb downstream 4152   true scaffold_5: 18880824-18884975 Arabidopsis lyrata
AL5G40200 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 18880824-18882823 Arabidopsis lyrata
AL5G40200 5.0kb upstream 5.0kb upstream 7152   true scaffold_5: 18882824-18889975 Arabidopsis lyrata
AL5G40200 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 18884976-18889975 Arabidopsis lyrata
AL5G40200 5.0kb downstream 5.0kb downstream 7152   true scaffold_5: 18877824-18884975 Arabidopsis lyrata
AL5G40200 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 18877824-18882823 Arabidopsis lyrata
AL5G40200 10.0kb upstream 10.0kb upstream 12152   true scaffold_5: 18882824-18894975 Arabidopsis lyrata
AL5G40200 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 18884976-18894975 Arabidopsis lyrata
AL5G40200 10.0kb downstream 10.0kb downstream 12152   true scaffold_5: 18872824-18884975 Arabidopsis lyrata
AL5G40200 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 18872824-18882823 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121512068 5273 Angiosperm View MSA
122380264 5261 Brassicaceae View MSA
123802629 5264 Brassicales-Malvales View MSA
124299810 5266 SBM View MSA
124151131 5268 Malvidae View MSA
123876632 5270 Rosid View MSA
123460282 5271 Pentapetalae View MSA
122495659 5272 Eudicot View MSA
120785094 5274 Embryophyte View MSA
122826967 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain