Gene : AL5G39910 A. lyrata v2.1
Defline:  (1 of 89) KOG1987 - Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains Genomic Order:  2675
Name:  ? AL5G39910 Secondary Identifier:  ? PAC:35921380
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G39910 0.5kb upstream 0.5kb upstream 2300   true scaffold_5: 18772894-18775193 Arabidopsis lyrata
AL5G39910 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 18774694-18775193 Arabidopsis lyrata
AL5G39910 0.5kb downstream 0.5kb downstream 2300   true scaffold_5: 18772394-18774693 Arabidopsis lyrata
AL5G39910 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 18772394-18772893 Arabidopsis lyrata
AL5G39910 1.0kb upstream 1.0kb upstream 2800   true scaffold_5: 18772894-18775693 Arabidopsis lyrata
AL5G39910 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 18774694-18775693 Arabidopsis lyrata
AL5G39910 1.0kb downstream 1.0kb downstream 2800   true scaffold_5: 18771894-18774693 Arabidopsis lyrata
AL5G39910 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 18771894-18772893 Arabidopsis lyrata
AL5G39910 2.0kb upstream 2.0kb upstream 3800   true scaffold_5: 18772894-18776693 Arabidopsis lyrata
AL5G39910 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 18774694-18776693 Arabidopsis lyrata
AL5G39910 2.0kb downstream 2.0kb downstream 3800   true scaffold_5: 18770894-18774693 Arabidopsis lyrata
AL5G39910 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 18770894-18772893 Arabidopsis lyrata
AL5G39910 5.0kb upstream 5.0kb upstream 6800   true scaffold_5: 18772894-18779693 Arabidopsis lyrata
AL5G39910 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 18774694-18779693 Arabidopsis lyrata
AL5G39910 5.0kb downstream 5.0kb downstream 6800   true scaffold_5: 18767894-18774693 Arabidopsis lyrata
AL5G39910 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 18767894-18772893 Arabidopsis lyrata
AL5G39910 10.0kb upstream 10.0kb upstream 11800   true scaffold_5: 18772894-18784693 Arabidopsis lyrata
AL5G39910 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 18774694-18784693 Arabidopsis lyrata
AL5G39910 10.0kb downstream 10.0kb downstream 11800   true scaffold_5: 18762894-18774693 Arabidopsis lyrata
AL5G39910 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 18762894-18772893 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121665424 5273 Angiosperm View MSA
122379968 5261 Brassicaceae View MSA
123802499 5264 Brassicales-Malvales View MSA
124299689 5266 SBM View MSA
124151030 5268 Malvidae View MSA
124050250 5270 Rosid View MSA
123619785 5271 Pentapetalae View MSA
122654221 5272 Eudicot View MSA
123429159 5275 Viridiplantae View MSA
120937392 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain