Gene : AL5G40420 A. lyrata v2.1

Defline:  (1 of 3) K14775 - ribosome biogenesis protein UTP30 (UTP30, RSL1D1) Genomic Order:  2725
Name:  ? AL5G40420 Secondary Identifier:  ? PAC:35921271

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G40420 0.5kb upstream 0.5kb upstream 2065   true scaffold_5: 18983050-18985114 Arabidopsis lyrata
AL5G40420 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 18983050-18983549 Arabidopsis lyrata
AL5G40420 0.5kb downstream 0.5kb downstream 2065   true scaffold_5: 18983550-18985614 Arabidopsis lyrata
AL5G40420 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 18985115-18985614 Arabidopsis lyrata
AL5G40420 1.0kb upstream 1.0kb upstream 2565   true scaffold_5: 18982550-18985114 Arabidopsis lyrata
AL5G40420 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 18982550-18983549 Arabidopsis lyrata
AL5G40420 1.0kb downstream 1.0kb downstream 2565   true scaffold_5: 18983550-18986114 Arabidopsis lyrata
AL5G40420 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 18985115-18986114 Arabidopsis lyrata
AL5G40420 2.0kb upstream 2.0kb upstream 3565   true scaffold_5: 18981550-18985114 Arabidopsis lyrata
AL5G40420 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 18981550-18983549 Arabidopsis lyrata
AL5G40420 2.0kb downstream 2.0kb downstream 3565   true scaffold_5: 18983550-18987114 Arabidopsis lyrata
AL5G40420 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 18985115-18987114 Arabidopsis lyrata
AL5G40420 5.0kb upstream 5.0kb upstream 6565   true scaffold_5: 18978550-18985114 Arabidopsis lyrata
AL5G40420 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 18978550-18983549 Arabidopsis lyrata
AL5G40420 5.0kb downstream 5.0kb downstream 6565   true scaffold_5: 18983550-18990114 Arabidopsis lyrata
AL5G40420 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 18985115-18990114 Arabidopsis lyrata
AL5G40420 10.0kb upstream 10.0kb upstream 11565   true scaffold_5: 18973550-18985114 Arabidopsis lyrata
AL5G40420 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 18973550-18983549 Arabidopsis lyrata
AL5G40420 10.0kb downstream 10.0kb downstream 11565   true scaffold_5: 18983550-18995114 Arabidopsis lyrata
AL5G40420 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 18985115-18995114 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373157 5261 Brassicaceae View MSA
123833753 5264 Brassicales-Malvales View MSA
124337406 5266 SBM View MSA
124250827 5268 Malvidae View MSA
124067749 5270 Rosid View MSA
123741990 5271 Pentapetalae View MSA
122792570 5272 Eudicot View MSA
122042558 5273 Angiosperm View MSA
121347008 5274 Embryophyte View MSA
123426351 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain