Gene : AL5G39900 A. lyrata v2.1
Defline:  (1 of 89) KOG1987 - Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains Genomic Order:  2674
Name:  ? AL5G39900 Secondary Identifier:  ? PAC:35920154
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G39900 0.5kb upstream 0.5kb upstream 2889   true scaffold_5: 18770265-18773153 Arabidopsis lyrata
AL5G39900 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 18772654-18773153 Arabidopsis lyrata
AL5G39900 0.5kb downstream 0.5kb downstream 2889   true scaffold_5: 18769765-18772653 Arabidopsis lyrata
AL5G39900 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 18769765-18770264 Arabidopsis lyrata
AL5G39900 1.0kb upstream 1.0kb upstream 3389   true scaffold_5: 18770265-18773653 Arabidopsis lyrata
AL5G39900 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 18772654-18773653 Arabidopsis lyrata
AL5G39900 1.0kb downstream 1.0kb downstream 3389   true scaffold_5: 18769265-18772653 Arabidopsis lyrata
AL5G39900 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 18769265-18770264 Arabidopsis lyrata
AL5G39900 2.0kb upstream 2.0kb upstream 4389   true scaffold_5: 18770265-18774653 Arabidopsis lyrata
AL5G39900 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 18772654-18774653 Arabidopsis lyrata
AL5G39900 2.0kb downstream 2.0kb downstream 4389   true scaffold_5: 18768265-18772653 Arabidopsis lyrata
AL5G39900 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 18768265-18770264 Arabidopsis lyrata
AL5G39900 5.0kb upstream 5.0kb upstream 7389   true scaffold_5: 18770265-18777653 Arabidopsis lyrata
AL5G39900 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 18772654-18777653 Arabidopsis lyrata
AL5G39900 5.0kb downstream 5.0kb downstream 7389   true scaffold_5: 18765265-18772653 Arabidopsis lyrata
AL5G39900 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 18765265-18770264 Arabidopsis lyrata
AL5G39900 10.0kb upstream 10.0kb upstream 12389   true scaffold_5: 18770265-18782653 Arabidopsis lyrata
AL5G39900 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 18772654-18782653 Arabidopsis lyrata
AL5G39900 10.0kb downstream 10.0kb downstream 12389   true scaffold_5: 18760265-18772653 Arabidopsis lyrata
AL5G39900 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 18760265-18770264 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121665424 5273 Angiosperm View MSA
122379968 5261 Brassicaceae View MSA
123802499 5264 Brassicales-Malvales View MSA
124299689 5266 SBM View MSA
124151030 5268 Malvidae View MSA
124050250 5270 Rosid View MSA
123619785 5271 Pentapetalae View MSA
122654221 5272 Eudicot View MSA
123429159 5275 Viridiplantae View MSA
120937392 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain