Gene : AL5G44050 A. lyrata v2.1

Defline:  (1 of 2) K10389 - tubulin gamma (TUBG) Genomic Order:  3061
Name:  ? AL5G44050 Secondary Identifier:  ? PAC:35918923

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5695 Arabidopsis lyrata pathologic  
Alyrata PWY-6608 Arabidopsis lyrata pathologic  
Alyrata PWY-6609 Arabidopsis lyrata pathologic  
Alyrata PWY-7179 Arabidopsis lyrata pathologic  
Alyrata SALVADEHYPOX-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G44050 0.5kb upstream 0.5kb upstream 3445   true scaffold_5: 20368942-20372386 Arabidopsis lyrata
AL5G44050 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 20371887-20372386 Arabidopsis lyrata
AL5G44050 0.5kb downstream 0.5kb downstream 3445   true scaffold_5: 20368442-20371886 Arabidopsis lyrata
AL5G44050 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 20368442-20368941 Arabidopsis lyrata
AL5G44050 1.0kb upstream 1.0kb upstream 3945   true scaffold_5: 20368942-20372886 Arabidopsis lyrata
AL5G44050 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 20371887-20372886 Arabidopsis lyrata
AL5G44050 1.0kb downstream 1.0kb downstream 3945   true scaffold_5: 20367942-20371886 Arabidopsis lyrata
AL5G44050 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 20367942-20368941 Arabidopsis lyrata
AL5G44050 2.0kb upstream 2.0kb upstream 4945   true scaffold_5: 20368942-20373886 Arabidopsis lyrata
AL5G44050 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 20371887-20373886 Arabidopsis lyrata
AL5G44050 2.0kb downstream 2.0kb downstream 4945   true scaffold_5: 20366942-20371886 Arabidopsis lyrata
AL5G44050 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 20366942-20368941 Arabidopsis lyrata
AL5G44050 5.0kb upstream 5.0kb upstream 7945   true scaffold_5: 20368942-20376886 Arabidopsis lyrata
AL5G44050 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 20371887-20376886 Arabidopsis lyrata
AL5G44050 5.0kb downstream 5.0kb downstream 7945   true scaffold_5: 20363942-20371886 Arabidopsis lyrata
AL5G44050 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 20363942-20368941 Arabidopsis lyrata
AL5G44050 10.0kb upstream 10.0kb upstream 12945   true scaffold_5: 20368942-20381886 Arabidopsis lyrata
AL5G44050 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 20371887-20381886 Arabidopsis lyrata
AL5G44050 10.0kb downstream 10.0kb downstream 12945   true scaffold_5: 20358942-20371886 Arabidopsis lyrata
AL5G44050 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 20358942-20368941 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380888 5261 Brassicaceae View MSA
123836063 5264 Brassicales-Malvales View MSA
124337609 5266 SBM View MSA
124248076 5268 Malvidae View MSA
124064606 5270 Rosid View MSA
123746134 5271 Pentapetalae View MSA
122785812 5272 Eudicot View MSA
122042290 5273 Angiosperm View MSA
121346688 5274 Embryophyte View MSA
123428620 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain