Gene : AL5G43390 A. lyrata v2.1
Defline:  (1 of 9) PF00046//PF01852 - Homeobox domain (Homeobox) // START domain (START) Genomic Order:  2998
Name:  ? AL5G43390 Secondary Identifier:  ? PAC:35920175
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0 Pathways

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G43390 0.5kb upstream 0.5kb upstream 5067   true scaffold_5: 20141709-20146775 Arabidopsis lyrata
AL5G43390 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 20141709-20142208 Arabidopsis lyrata
AL5G43390 0.5kb downstream 0.5kb downstream 5067   true scaffold_5: 20142209-20147275 Arabidopsis lyrata
AL5G43390 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 20146776-20147275 Arabidopsis lyrata
AL5G43390 1.0kb upstream 1.0kb upstream 5567   true scaffold_5: 20141209-20146775 Arabidopsis lyrata
AL5G43390 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 20141209-20142208 Arabidopsis lyrata
AL5G43390 1.0kb downstream 1.0kb downstream 5567   true scaffold_5: 20142209-20147775 Arabidopsis lyrata
AL5G43390 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 20146776-20147775 Arabidopsis lyrata
AL5G43390 2.0kb upstream 2.0kb upstream 6567   true scaffold_5: 20140209-20146775 Arabidopsis lyrata
AL5G43390 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 20140209-20142208 Arabidopsis lyrata
AL5G43390 2.0kb downstream 2.0kb downstream 6567   true scaffold_5: 20142209-20148775 Arabidopsis lyrata
AL5G43390 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 20146776-20148775 Arabidopsis lyrata
AL5G43390 5.0kb upstream 5.0kb upstream 9567   true scaffold_5: 20137209-20146775 Arabidopsis lyrata
AL5G43390 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 20137209-20142208 Arabidopsis lyrata
AL5G43390 5.0kb downstream 5.0kb downstream 9567   true scaffold_5: 20142209-20151775 Arabidopsis lyrata
AL5G43390 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 20146776-20151775 Arabidopsis lyrata
AL5G43390 10.0kb upstream 10.0kb upstream 14567   true scaffold_5: 20132209-20146775 Arabidopsis lyrata
AL5G43390 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 20132209-20142208 Arabidopsis lyrata
AL5G43390 10.0kb downstream 10.0kb downstream 14567   true scaffold_5: 20142209-20156775 Arabidopsis lyrata
AL5G43390 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 20146776-20156775 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371211 5261 Brassicaceae View MSA
123800125 5264 Brassicales-Malvales View MSA
124297574 5266 SBM View MSA
124149426 5268 Malvidae View MSA
124063291 5270 Rosid View MSA
123740352 5271 Pentapetalae View MSA
122790073 5272 Eudicot View MSA
122048483 5273 Angiosperm View MSA
121350910 5274 Embryophyte View MSA
123381934 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain