Gene : AL5G43420 A. lyrata v2.1
Defline:  (1 of 9) PTHR33830:SF3 - DEFENSIN-LIKE PROTEIN 122-RELATED Genomic Order:  3001
Name:  ? AL5G43420 Secondary Identifier:  ? PAC:35920099
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G43420 0.5kb upstream 0.5kb upstream 831   true scaffold_5: 20154306-20155136 Arabidopsis lyrata
AL5G43420 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 20154637-20155136 Arabidopsis lyrata
AL5G43420 0.5kb downstream 0.5kb downstream 831   true scaffold_5: 20153806-20154636 Arabidopsis lyrata
AL5G43420 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 20153806-20154305 Arabidopsis lyrata
AL5G43420 1.0kb upstream 1.0kb upstream 1331   true scaffold_5: 20154306-20155636 Arabidopsis lyrata
AL5G43420 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 20154637-20155636 Arabidopsis lyrata
AL5G43420 1.0kb downstream 1.0kb downstream 1331   true scaffold_5: 20153306-20154636 Arabidopsis lyrata
AL5G43420 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 20153306-20154305 Arabidopsis lyrata
AL5G43420 2.0kb upstream 2.0kb upstream 2331   true scaffold_5: 20154306-20156636 Arabidopsis lyrata
AL5G43420 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 20154637-20156636 Arabidopsis lyrata
AL5G43420 2.0kb downstream 2.0kb downstream 2331   true scaffold_5: 20152306-20154636 Arabidopsis lyrata
AL5G43420 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 20152306-20154305 Arabidopsis lyrata
AL5G43420 5.0kb upstream 5.0kb upstream 5331   true scaffold_5: 20154306-20159636 Arabidopsis lyrata
AL5G43420 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 20154637-20159636 Arabidopsis lyrata
AL5G43420 5.0kb downstream 5.0kb downstream 5331   true scaffold_5: 20149306-20154636 Arabidopsis lyrata
AL5G43420 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 20149306-20154305 Arabidopsis lyrata
AL5G43420 10.0kb upstream 10.0kb upstream 10331   true scaffold_5: 20154306-20164636 Arabidopsis lyrata
AL5G43420 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 20154637-20164636 Arabidopsis lyrata
AL5G43420 10.0kb downstream 10.0kb downstream 10331   true scaffold_5: 20144306-20154636 Arabidopsis lyrata
AL5G43420 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 20144306-20154305 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792133 5273 Angiosperm View MSA
122370998 5261 Brassicaceae View MSA
123841000 5264 Brassicales-Malvales View MSA
124322820 5266 SBM View MSA
124251397 5268 Malvidae View MSA
124067401 5270 Rosid View MSA
123743891 5271 Pentapetalae View MSA
122796538 5272 Eudicot View MSA
121063384 5274 Embryophyte View MSA
123103137 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain