Gene : AL5G42980 A. lyrata v2.1
Defline:  (1 of 13) PF04640 - PLATZ transcription factor (PLATZ) Genomic Order:  2960
Name:  ? AL5G42980 Secondary Identifier:  ? PAC:35921161
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G42980 0.5kb upstream 0.5kb upstream 2235   true scaffold_5: 19995688-19997922 Arabidopsis lyrata
AL5G42980 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 19997423-19997922 Arabidopsis lyrata
AL5G42980 0.5kb downstream 0.5kb downstream 2235   true scaffold_5: 19995188-19997422 Arabidopsis lyrata
AL5G42980 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 19995188-19995687 Arabidopsis lyrata
AL5G42980 1.0kb upstream 1.0kb upstream 2735   true scaffold_5: 19995688-19998422 Arabidopsis lyrata
AL5G42980 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 19997423-19998422 Arabidopsis lyrata
AL5G42980 1.0kb downstream 1.0kb downstream 2735   true scaffold_5: 19994688-19997422 Arabidopsis lyrata
AL5G42980 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 19994688-19995687 Arabidopsis lyrata
AL5G42980 2.0kb upstream 2.0kb upstream 3735   true scaffold_5: 19995688-19999422 Arabidopsis lyrata
AL5G42980 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 19997423-19999422 Arabidopsis lyrata
AL5G42980 2.0kb downstream 2.0kb downstream 3735   true scaffold_5: 19993688-19997422 Arabidopsis lyrata
AL5G42980 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 19993688-19995687 Arabidopsis lyrata
AL5G42980 5.0kb upstream 5.0kb upstream 6735   true scaffold_5: 19995688-20002422 Arabidopsis lyrata
AL5G42980 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 19997423-20002422 Arabidopsis lyrata
AL5G42980 5.0kb downstream 5.0kb downstream 6735   true scaffold_5: 19990688-19997422 Arabidopsis lyrata
AL5G42980 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 19990688-19995687 Arabidopsis lyrata
AL5G42980 10.0kb upstream 10.0kb upstream 11735   true scaffold_5: 19995688-20007422 Arabidopsis lyrata
AL5G42980 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 19997423-20007422 Arabidopsis lyrata
AL5G42980 10.0kb downstream 10.0kb downstream 11735   true scaffold_5: 19985688-19997422 Arabidopsis lyrata
AL5G42980 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 19985688-19995687 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368964 5261 Brassicaceae View MSA
123835234 5264 Brassicales-Malvales View MSA
124343314 5266 SBM View MSA
124253522 5268 Malvidae View MSA
124069177 5270 Rosid View MSA
123750215 5271 Pentapetalae View MSA
122789413 5272 Eudicot View MSA
122043598 5273 Angiosperm View MSA
121349888 5274 Embryophyte View MSA
123428703 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain