Gene : AL5G42210 A. lyrata v2.1
Defline:  (1 of 2) PTHR31251:SF8 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 1-RELATED Genomic Order:  2890
Name:  ? AL5G42210 Secondary Identifier:  ? PAC:35919035
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G42210 0.5kb upstream 0.5kb upstream 4761   true scaffold_5: 19629792-19634552 Arabidopsis lyrata
AL5G42210 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 19634053-19634552 Arabidopsis lyrata
AL5G42210 0.5kb downstream 0.5kb downstream 4761   true scaffold_5: 19629292-19634052 Arabidopsis lyrata
AL5G42210 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 19629292-19629791 Arabidopsis lyrata
AL5G42210 1.0kb upstream 1.0kb upstream 5261   true scaffold_5: 19629792-19635052 Arabidopsis lyrata
AL5G42210 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 19634053-19635052 Arabidopsis lyrata
AL5G42210 1.0kb downstream 1.0kb downstream 5261   true scaffold_5: 19628792-19634052 Arabidopsis lyrata
AL5G42210 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 19628792-19629791 Arabidopsis lyrata
AL5G42210 2.0kb upstream 2.0kb upstream 6261   true scaffold_5: 19629792-19636052 Arabidopsis lyrata
AL5G42210 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 19634053-19636052 Arabidopsis lyrata
AL5G42210 2.0kb downstream 2.0kb downstream 6261   true scaffold_5: 19627792-19634052 Arabidopsis lyrata
AL5G42210 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 19627792-19629791 Arabidopsis lyrata
AL5G42210 5.0kb upstream 5.0kb upstream 9261   true scaffold_5: 19629792-19639052 Arabidopsis lyrata
AL5G42210 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 19634053-19639052 Arabidopsis lyrata
AL5G42210 5.0kb downstream 5.0kb downstream 9261   true scaffold_5: 19624792-19634052 Arabidopsis lyrata
AL5G42210 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 19624792-19629791 Arabidopsis lyrata
AL5G42210 10.0kb upstream 10.0kb upstream 14261   true scaffold_5: 19629792-19644052 Arabidopsis lyrata
AL5G42210 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 19634053-19644052 Arabidopsis lyrata
AL5G42210 10.0kb downstream 10.0kb downstream 14261   true scaffold_5: 19619792-19634052 Arabidopsis lyrata
AL5G42210 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 19619792-19629791 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343263 5261 Brassicaceae View MSA
123837050 5264 Brassicales-Malvales View MSA
124344494 5266 SBM View MSA
124254656 5268 Malvidae View MSA
124070575 5270 Rosid View MSA
123744232 5271 Pentapetalae View MSA
122791622 5272 Eudicot View MSA
122044652 5273 Angiosperm View MSA
121350416 5274 Embryophyte View MSA
123426856 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain