Gene : AL5G42180 A. lyrata v2.1
Defline:  (1 of 2) PTHR31807:SF6 - PROTEIN ENDOSPERM DEFECTIVE 1-RELATED Genomic Order:  2887
Name:  ? AL5G42180 Secondary Identifier:  ? PAC:35918455
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G42180 0.5kb upstream 0.5kb upstream 2465   true scaffold_5: 19624877-19627341 Arabidopsis lyrata
AL5G42180 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 19624877-19625376 Arabidopsis lyrata
AL5G42180 0.5kb downstream 0.5kb downstream 2465   true scaffold_5: 19625377-19627841 Arabidopsis lyrata
AL5G42180 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 19627342-19627841 Arabidopsis lyrata
AL5G42180 1.0kb upstream 1.0kb upstream 2965   true scaffold_5: 19624377-19627341 Arabidopsis lyrata
AL5G42180 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 19624377-19625376 Arabidopsis lyrata
AL5G42180 1.0kb downstream 1.0kb downstream 2965   true scaffold_5: 19625377-19628341 Arabidopsis lyrata
AL5G42180 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 19627342-19628341 Arabidopsis lyrata
AL5G42180 2.0kb upstream 2.0kb upstream 3965   true scaffold_5: 19623377-19627341 Arabidopsis lyrata
AL5G42180 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 19623377-19625376 Arabidopsis lyrata
AL5G42180 2.0kb downstream 2.0kb downstream 3965   true scaffold_5: 19625377-19629341 Arabidopsis lyrata
AL5G42180 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 19627342-19629341 Arabidopsis lyrata
AL5G42180 5.0kb upstream 5.0kb upstream 6965   true scaffold_5: 19620377-19627341 Arabidopsis lyrata
AL5G42180 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 19620377-19625376 Arabidopsis lyrata
AL5G42180 5.0kb downstream 5.0kb downstream 6965   true scaffold_5: 19625377-19632341 Arabidopsis lyrata
AL5G42180 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 19627342-19632341 Arabidopsis lyrata
AL5G42180 10.0kb upstream 10.0kb upstream 11965   true scaffold_5: 19615377-19627341 Arabidopsis lyrata
AL5G42180 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 19615377-19625376 Arabidopsis lyrata
AL5G42180 10.0kb downstream 10.0kb downstream 11965   true scaffold_5: 19625377-19637341 Arabidopsis lyrata
AL5G42180 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 19627342-19637341 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375884 5261 Brassicaceae View MSA
123801080 5264 Brassicales-Malvales View MSA
124298421 5266 SBM View MSA
124150070 5268 Malvidae View MSA
124067070 5270 Rosid View MSA
123752575 5271 Pentapetalae View MSA
122788375 5272 Eudicot View MSA
122044458 5273 Angiosperm View MSA
121348675 5274 Embryophyte View MSA
123426167 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain