Gene : AL5G46160 A. lyrata v2.1
Defline:  (1 of 5) PTHR31351:SF4 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MWI23-RELATED Genomic Order:  3261
Name:  ? AL5G46160 Secondary Identifier:  ? PAC:35920333
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G46160 0.5kb upstream 0.5kb upstream 3131   true scaffold_5: 21135447-21138577 Arabidopsis lyrata
AL5G46160 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 21135447-21135946 Arabidopsis lyrata
AL5G46160 0.5kb downstream 0.5kb downstream 3131   true scaffold_5: 21135947-21139077 Arabidopsis lyrata
AL5G46160 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 21138578-21139077 Arabidopsis lyrata
AL5G46160 1.0kb upstream 1.0kb upstream 3631   true scaffold_5: 21134947-21138577 Arabidopsis lyrata
AL5G46160 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 21134947-21135946 Arabidopsis lyrata
AL5G46160 1.0kb downstream 1.0kb downstream 3631   true scaffold_5: 21135947-21139577 Arabidopsis lyrata
AL5G46160 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 21138578-21139577 Arabidopsis lyrata
AL5G46160 2.0kb upstream 2.0kb upstream 4631   true scaffold_5: 21133947-21138577 Arabidopsis lyrata
AL5G46160 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 21133947-21135946 Arabidopsis lyrata
AL5G46160 2.0kb downstream 2.0kb downstream 4631   true scaffold_5: 21135947-21140577 Arabidopsis lyrata
AL5G46160 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 21138578-21140577 Arabidopsis lyrata
AL5G46160 5.0kb upstream 5.0kb upstream 7631   true scaffold_5: 21130947-21138577 Arabidopsis lyrata
AL5G46160 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 21130947-21135946 Arabidopsis lyrata
AL5G46160 5.0kb downstream 5.0kb downstream 7631   true scaffold_5: 21135947-21143577 Arabidopsis lyrata
AL5G46160 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 21138578-21143577 Arabidopsis lyrata
AL5G46160 10.0kb upstream 10.0kb upstream 12631   true scaffold_5: 21125947-21138577 Arabidopsis lyrata
AL5G46160 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 21125947-21135946 Arabidopsis lyrata
AL5G46160 10.0kb downstream 10.0kb downstream 12631   true scaffold_5: 21135947-21148577 Arabidopsis lyrata
AL5G46160 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 21138578-21148577 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361104 5261 Brassicaceae View MSA
123827461 5264 Brassicales-Malvales View MSA
124338538 5266 SBM View MSA
124254442 5268 Malvidae View MSA
124061946 5270 Rosid View MSA
123746535 5271 Pentapetalae View MSA
122785782 5272 Eudicot View MSA
122047623 5273 Angiosperm View MSA
121348921 5274 Embryophyte View MSA
123381080 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain