Gene : AL535U10010 A. lyrata v2.1

Defline:  (1 of 82) 1.11.1.7 - Peroxidase / Lactoperoxidase Genomic Order:  1
Name:  ? AL535U10010 Secondary Identifier:  ? PAC:35930111

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5466 Arabidopsis lyrata pathologic  
Alyrata PWY-7214 Arabidopsis lyrata pathologic  
Alyrata PWY-7445 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL535U10010 0.5kb upstream 0.5kb upstream 1286   true scaffold_535: 356-1641 Arabidopsis lyrata
AL535U10010 0.5kb upstream 0.5kb upstream 500   false scaffold_535: 1142-1641 Arabidopsis lyrata
AL535U10010 0.5kb downstream 0.5kb downstream 1141   true scaffold_535: 1-1141 Arabidopsis lyrata
AL535U10010 0.5kb downstream 0.5kb downstream 355   false scaffold_535: 1-355 Arabidopsis lyrata
AL535U10010 1.0kb upstream 1.0kb upstream 1786   true scaffold_535: 356-2141 Arabidopsis lyrata
AL535U10010 1.0kb upstream 1.0kb upstream 1000   false scaffold_535: 1142-2141 Arabidopsis lyrata
AL535U10010 1.0kb downstream 1.0kb downstream 1141   true scaffold_535: 1-1141 Arabidopsis lyrata
AL535U10010 1.0kb downstream 1.0kb downstream 355   false scaffold_535: 1-355 Arabidopsis lyrata
AL535U10010 2.0kb upstream 2.0kb upstream 2786   true scaffold_535: 356-3141 Arabidopsis lyrata
AL535U10010 2.0kb upstream 2.0kb upstream 2000   false scaffold_535: 1142-3141 Arabidopsis lyrata
AL535U10010 2.0kb downstream 2.0kb downstream 1141   true scaffold_535: 1-1141 Arabidopsis lyrata
AL535U10010 2.0kb downstream 2.0kb downstream 355   false scaffold_535: 1-355 Arabidopsis lyrata
AL535U10010 5.0kb upstream 5.0kb upstream 5786   true scaffold_535: 356-6141 Arabidopsis lyrata
AL535U10010 5.0kb upstream 5.0kb upstream 5000   false scaffold_535: 1142-6141 Arabidopsis lyrata
AL535U10010 5.0kb downstream 5.0kb downstream 1141   true scaffold_535: 1-1141 Arabidopsis lyrata
AL535U10010 5.0kb downstream 5.0kb downstream 355   false scaffold_535: 1-355 Arabidopsis lyrata
AL535U10010 10.0kb upstream 10.0kb upstream 6765   true scaffold_535: 356-7120 Arabidopsis lyrata
AL535U10010 10.0kb upstream 10.0kb upstream 5979   false scaffold_535: 1142-7120 Arabidopsis lyrata
AL535U10010 10.0kb downstream 10.0kb downstream 1141   true scaffold_535: 1-1141 Arabidopsis lyrata
AL535U10010 10.0kb downstream 10.0kb downstream 355   false scaffold_535: 1-355 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122327826 5261 Brassicaceae View MSA
123840732 5264 Brassicales-Malvales View MSA
124322777 5266 SBM View MSA
124249587 5268 Malvidae View MSA
124074807 5270 Rosid View MSA
123752607 5271 Pentapetalae View MSA
122796741 5272 Eudicot View MSA
122051577 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain