Gene : AL5G45730 A. lyrata v2.1

Defline:  (1 of 3) PTHR10168:SF118 - GLUTAREDOXIN-C11-RELATED Genomic Order:  3219
Name:  ? AL5G45730 Secondary Identifier:  ? PAC:35920913

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata THIOREDOX-PWY Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G45730 0.5kb upstream 0.5kb upstream 1186   true scaffold_5: 20980936-20982121 Arabidopsis lyrata
AL5G45730 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 20980936-20981435 Arabidopsis lyrata
AL5G45730 0.5kb downstream 0.5kb downstream 1186   true scaffold_5: 20981436-20982621 Arabidopsis lyrata
AL5G45730 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 20982122-20982621 Arabidopsis lyrata
AL5G45730 1.0kb upstream 1.0kb upstream 1686   true scaffold_5: 20980436-20982121 Arabidopsis lyrata
AL5G45730 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 20980436-20981435 Arabidopsis lyrata
AL5G45730 1.0kb downstream 1.0kb downstream 1686   true scaffold_5: 20981436-20983121 Arabidopsis lyrata
AL5G45730 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 20982122-20983121 Arabidopsis lyrata
AL5G45730 2.0kb upstream 2.0kb upstream 2686   true scaffold_5: 20979436-20982121 Arabidopsis lyrata
AL5G45730 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 20979436-20981435 Arabidopsis lyrata
AL5G45730 2.0kb downstream 2.0kb downstream 2686   true scaffold_5: 20981436-20984121 Arabidopsis lyrata
AL5G45730 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 20982122-20984121 Arabidopsis lyrata
AL5G45730 5.0kb upstream 5.0kb upstream 5686   true scaffold_5: 20976436-20982121 Arabidopsis lyrata
AL5G45730 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 20976436-20981435 Arabidopsis lyrata
AL5G45730 5.0kb downstream 5.0kb downstream 5686   true scaffold_5: 20981436-20987121 Arabidopsis lyrata
AL5G45730 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 20982122-20987121 Arabidopsis lyrata
AL5G45730 10.0kb upstream 10.0kb upstream 10686   true scaffold_5: 20971436-20982121 Arabidopsis lyrata
AL5G45730 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 20971436-20981435 Arabidopsis lyrata
AL5G45730 10.0kb downstream 10.0kb downstream 10686   true scaffold_5: 20981436-20992121 Arabidopsis lyrata
AL5G45730 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 20982122-20992121 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373515 5261 Brassicaceae View MSA
123836774 5264 Brassicales-Malvales View MSA
124350155 5266 SBM View MSA
124244333 5268 Malvidae View MSA
124063697 5270 Rosid View MSA
123752852 5271 Pentapetalae View MSA
122796200 5272 Eudicot View MSA
122047042 5273 Angiosperm View MSA
121349593 5274 Embryophyte View MSA
123381368 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain