Gene : AL5G45800 A. lyrata v2.1

Defline:  (1 of 1) PTHR23024:SF98 - GIBBERELLIN RECEPTOR GID1B Genomic Order:  3225
Name:  ? AL5G45800 Secondary Identifier:  ? PAC:35918675

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-6303 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G45800 0.5kb upstream 0.5kb upstream 2491   true scaffold_5: 21012767-21015257 Arabidopsis lyrata
AL5G45800 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 21012767-21013266 Arabidopsis lyrata
AL5G45800 0.5kb downstream 0.5kb downstream 2491   true scaffold_5: 21013267-21015757 Arabidopsis lyrata
AL5G45800 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 21015258-21015757 Arabidopsis lyrata
AL5G45800 1.0kb upstream 1.0kb upstream 2991   true scaffold_5: 21012267-21015257 Arabidopsis lyrata
AL5G45800 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 21012267-21013266 Arabidopsis lyrata
AL5G45800 1.0kb downstream 1.0kb downstream 2991   true scaffold_5: 21013267-21016257 Arabidopsis lyrata
AL5G45800 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 21015258-21016257 Arabidopsis lyrata
AL5G45800 2.0kb upstream 2.0kb upstream 3991   true scaffold_5: 21011267-21015257 Arabidopsis lyrata
AL5G45800 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 21011267-21013266 Arabidopsis lyrata
AL5G45800 2.0kb downstream 2.0kb downstream 3991   true scaffold_5: 21013267-21017257 Arabidopsis lyrata
AL5G45800 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 21015258-21017257 Arabidopsis lyrata
AL5G45800 5.0kb upstream 5.0kb upstream 6991   true scaffold_5: 21008267-21015257 Arabidopsis lyrata
AL5G45800 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 21008267-21013266 Arabidopsis lyrata
AL5G45800 5.0kb downstream 5.0kb downstream 6991   true scaffold_5: 21013267-21020257 Arabidopsis lyrata
AL5G45800 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 21015258-21020257 Arabidopsis lyrata
AL5G45800 10.0kb upstream 10.0kb upstream 11991   true scaffold_5: 21003267-21015257 Arabidopsis lyrata
AL5G45800 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 21003267-21013266 Arabidopsis lyrata
AL5G45800 10.0kb downstream 10.0kb downstream 11991   true scaffold_5: 21013267-21025257 Arabidopsis lyrata
AL5G45800 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 21015258-21025257 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369158 5261 Brassicaceae View MSA
123827560 5264 Brassicales-Malvales View MSA
124336424 5266 SBM View MSA
124241929 5268 Malvidae View MSA
124064220 5270 Rosid View MSA
123745605 5271 Pentapetalae View MSA
122795616 5272 Eudicot View MSA
122044098 5273 Angiosperm View MSA
123428915 5275 Viridiplantae View MSA
121350684 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain