Gene : AL5G45890 A. lyrata v2.1
Defline:  (1 of 2) PTHR12550:SF5 - HUA2-LIKE PROTEIN 2-RELATED Genomic Order:  3234
Name:  ? AL5G45890 Secondary Identifier:  ? PAC:35918529
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0 Pathways

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL5G45890 0.5kb upstream 0.5kb upstream 7996   true scaffold_5: 21031377-21039372 Arabidopsis lyrata
AL5G45890 0.5kb upstream 0.5kb upstream 500   false scaffold_5: 21031377-21031876 Arabidopsis lyrata
AL5G45890 0.5kb downstream 0.5kb downstream 7996   true scaffold_5: 21031877-21039872 Arabidopsis lyrata
AL5G45890 0.5kb downstream 0.5kb downstream 500   false scaffold_5: 21039373-21039872 Arabidopsis lyrata
AL5G45890 1.0kb upstream 1.0kb upstream 8496   true scaffold_5: 21030877-21039372 Arabidopsis lyrata
AL5G45890 1.0kb upstream 1.0kb upstream 1000   false scaffold_5: 21030877-21031876 Arabidopsis lyrata
AL5G45890 1.0kb downstream 1.0kb downstream 8496   true scaffold_5: 21031877-21040372 Arabidopsis lyrata
AL5G45890 1.0kb downstream 1.0kb downstream 1000   false scaffold_5: 21039373-21040372 Arabidopsis lyrata
AL5G45890 2.0kb upstream 2.0kb upstream 9496   true scaffold_5: 21029877-21039372 Arabidopsis lyrata
AL5G45890 2.0kb upstream 2.0kb upstream 2000   false scaffold_5: 21029877-21031876 Arabidopsis lyrata
AL5G45890 2.0kb downstream 2.0kb downstream 9496   true scaffold_5: 21031877-21041372 Arabidopsis lyrata
AL5G45890 2.0kb downstream 2.0kb downstream 2000   false scaffold_5: 21039373-21041372 Arabidopsis lyrata
AL5G45890 5.0kb upstream 5.0kb upstream 12496   true scaffold_5: 21026877-21039372 Arabidopsis lyrata
AL5G45890 5.0kb upstream 5.0kb upstream 5000   false scaffold_5: 21026877-21031876 Arabidopsis lyrata
AL5G45890 5.0kb downstream 5.0kb downstream 12496   true scaffold_5: 21031877-21044372 Arabidopsis lyrata
AL5G45890 5.0kb downstream 5.0kb downstream 5000   false scaffold_5: 21039373-21044372 Arabidopsis lyrata
AL5G45890 10.0kb upstream 10.0kb upstream 17496   true scaffold_5: 21021877-21039372 Arabidopsis lyrata
AL5G45890 10.0kb upstream 10.0kb upstream 10000   false scaffold_5: 21021877-21031876 Arabidopsis lyrata
AL5G45890 10.0kb downstream 10.0kb downstream 17496   true scaffold_5: 21031877-21049372 Arabidopsis lyrata
AL5G45890 10.0kb downstream 10.0kb downstream 10000   false scaffold_5: 21039373-21049372 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370083 5261 Brassicaceae View MSA
123839388 5264 Brassicales-Malvales View MSA
124337608 5266 SBM View MSA
124240604 5268 Malvidae View MSA
124068925 5270 Rosid View MSA
123739923 5271 Pentapetalae View MSA
122787365 5272 Eudicot View MSA
122045981 5273 Angiosperm View MSA
121348471 5274 Embryophyte View MSA
123424079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain