Gene : AL6G12610 A. lyrata v2.1

Defline:  (1 of 7) 1.1.1.41 - Isocitrate dehydrogenase (NAD(+)) / Nicotinamide adenine dinucleotide isocitrate dehydrogenase Genomic Order:  242
Name:  ? AL6G12610 Secondary Identifier:  ? PAC:35928249

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5464 Arabidopsis lyrata pathologic  
Alyrata PWY-5690 Arabidopsis lyrata pathologic  
Alyrata PWY-6549 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G12610 0.5kb upstream 0.5kb upstream 2975   true scaffold_6: 934113-937087 Arabidopsis lyrata
AL6G12610 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 934113-934612 Arabidopsis lyrata
AL6G12610 0.5kb downstream 0.5kb downstream 2975   true scaffold_6: 934613-937587 Arabidopsis lyrata
AL6G12610 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 937088-937587 Arabidopsis lyrata
AL6G12610 1.0kb upstream 1.0kb upstream 3475   true scaffold_6: 933613-937087 Arabidopsis lyrata
AL6G12610 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 933613-934612 Arabidopsis lyrata
AL6G12610 1.0kb downstream 1.0kb downstream 3475   true scaffold_6: 934613-938087 Arabidopsis lyrata
AL6G12610 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 937088-938087 Arabidopsis lyrata
AL6G12610 2.0kb upstream 2.0kb upstream 4475   true scaffold_6: 932613-937087 Arabidopsis lyrata
AL6G12610 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 932613-934612 Arabidopsis lyrata
AL6G12610 2.0kb downstream 2.0kb downstream 4475   true scaffold_6: 934613-939087 Arabidopsis lyrata
AL6G12610 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 937088-939087 Arabidopsis lyrata
AL6G12610 5.0kb upstream 5.0kb upstream 7475   true scaffold_6: 929613-937087 Arabidopsis lyrata
AL6G12610 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 929613-934612 Arabidopsis lyrata
AL6G12610 5.0kb downstream 5.0kb downstream 7475   true scaffold_6: 934613-942087 Arabidopsis lyrata
AL6G12610 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 937088-942087 Arabidopsis lyrata
AL6G12610 10.0kb upstream 10.0kb upstream 12475   true scaffold_6: 924613-937087 Arabidopsis lyrata
AL6G12610 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 924613-934612 Arabidopsis lyrata
AL6G12610 10.0kb downstream 10.0kb downstream 12475   true scaffold_6: 934613-947087 Arabidopsis lyrata
AL6G12610 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 937088-947087 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367648 5261 Brassicaceae View MSA
123834556 5264 Brassicales-Malvales View MSA
124340009 5266 SBM View MSA
124251295 5268 Malvidae View MSA
124066571 5270 Rosid View MSA
123739712 5271 Pentapetalae View MSA
122792664 5272 Eudicot View MSA
122041698 5273 Angiosperm View MSA
121349734 5274 Embryophyte View MSA
123425496 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain