Gene : AL6G14540 A. lyrata v2.1

Defline:  (1 of 3) PTHR24349:SF161 - CALCIUM-DEPENDENT PROTEIN KINASE 1-RELATED Genomic Order:  425
Name:  ? AL6G14540 Secondary Identifier:  ? PAC:35927661

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G14540 0.5kb upstream 0.5kb upstream 4245   true scaffold_6: 1679939-1684183 Arabidopsis lyrata
AL6G14540 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 1683684-1684183 Arabidopsis lyrata
AL6G14540 0.5kb downstream 0.5kb downstream 4245   true scaffold_6: 1679439-1683683 Arabidopsis lyrata
AL6G14540 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 1679439-1679938 Arabidopsis lyrata
AL6G14540 1.0kb upstream 1.0kb upstream 4745   true scaffold_6: 1679939-1684683 Arabidopsis lyrata
AL6G14540 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 1683684-1684683 Arabidopsis lyrata
AL6G14540 1.0kb downstream 1.0kb downstream 4745   true scaffold_6: 1678939-1683683 Arabidopsis lyrata
AL6G14540 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 1678939-1679938 Arabidopsis lyrata
AL6G14540 2.0kb upstream 2.0kb upstream 5745   true scaffold_6: 1679939-1685683 Arabidopsis lyrata
AL6G14540 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 1683684-1685683 Arabidopsis lyrata
AL6G14540 2.0kb downstream 2.0kb downstream 5745   true scaffold_6: 1677939-1683683 Arabidopsis lyrata
AL6G14540 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 1677939-1679938 Arabidopsis lyrata
AL6G14540 5.0kb upstream 5.0kb upstream 8745   true scaffold_6: 1679939-1688683 Arabidopsis lyrata
AL6G14540 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 1683684-1688683 Arabidopsis lyrata
AL6G14540 5.0kb downstream 5.0kb downstream 8745   true scaffold_6: 1674939-1683683 Arabidopsis lyrata
AL6G14540 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 1674939-1679938 Arabidopsis lyrata
AL6G14540 10.0kb upstream 10.0kb upstream 13745   true scaffold_6: 1679939-1693683 Arabidopsis lyrata
AL6G14540 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 1683684-1693683 Arabidopsis lyrata
AL6G14540 10.0kb downstream 10.0kb downstream 13745   true scaffold_6: 1669939-1683683 Arabidopsis lyrata
AL6G14540 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 1669939-1679938 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377435 5261 Brassicaceae View MSA
123837639 5264 Brassicales-Malvales View MSA
124341307 5266 SBM View MSA
124237354 5268 Malvidae View MSA
124072491 5270 Rosid View MSA
123744459 5271 Pentapetalae View MSA
122794301 5272 Eudicot View MSA
122047309 5273 Angiosperm View MSA
121350946 5274 Embryophyte View MSA
123428456 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain