Gene : AL6G15010 A. lyrata v2.1

Defline:  (1 of 1) PTHR13301//PTHR13301:SF64 - X-BOX TRANSCRIPTION FACTOR-RELATED // SUBFAMILY NOT NAMED Genomic Order:  472
Name:  ? AL6G15010 Secondary Identifier:  ? PAC:35927469

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-1001 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G15010 0.5kb upstream 0.5kb upstream 5763   true scaffold_6: 1868856-1874618 Arabidopsis lyrata
AL6G15010 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 1874119-1874618 Arabidopsis lyrata
AL6G15010 0.5kb downstream 0.5kb downstream 5763   true scaffold_6: 1868356-1874118 Arabidopsis lyrata
AL6G15010 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 1868356-1868855 Arabidopsis lyrata
AL6G15010 1.0kb upstream 1.0kb upstream 6263   true scaffold_6: 1868856-1875118 Arabidopsis lyrata
AL6G15010 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 1874119-1875118 Arabidopsis lyrata
AL6G15010 1.0kb downstream 1.0kb downstream 6263   true scaffold_6: 1867856-1874118 Arabidopsis lyrata
AL6G15010 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 1867856-1868855 Arabidopsis lyrata
AL6G15010 2.0kb upstream 2.0kb upstream 7263   true scaffold_6: 1868856-1876118 Arabidopsis lyrata
AL6G15010 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 1874119-1876118 Arabidopsis lyrata
AL6G15010 2.0kb downstream 2.0kb downstream 7263   true scaffold_6: 1866856-1874118 Arabidopsis lyrata
AL6G15010 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 1866856-1868855 Arabidopsis lyrata
AL6G15010 5.0kb upstream 5.0kb upstream 10263   true scaffold_6: 1868856-1879118 Arabidopsis lyrata
AL6G15010 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 1874119-1879118 Arabidopsis lyrata
AL6G15010 5.0kb downstream 5.0kb downstream 10263   true scaffold_6: 1863856-1874118 Arabidopsis lyrata
AL6G15010 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 1863856-1868855 Arabidopsis lyrata
AL6G15010 10.0kb upstream 10.0kb upstream 15263   true scaffold_6: 1868856-1884118 Arabidopsis lyrata
AL6G15010 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 1874119-1884118 Arabidopsis lyrata
AL6G15010 10.0kb downstream 10.0kb downstream 15263   true scaffold_6: 1858856-1874118 Arabidopsis lyrata
AL6G15010 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 1858856-1868855 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366565 5261 Brassicaceae View MSA
123829715 5264 Brassicales-Malvales View MSA
124350218 5266 SBM View MSA
124240162 5268 Malvidae View MSA
124068602 5270 Rosid View MSA
123746424 5271 Pentapetalae View MSA
122793475 5272 Eudicot View MSA
122046929 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain