Gene : AL6G13850 A. lyrata v2.1

Defline:  (1 of 4) 4.3.1.24 - Phenylalanine ammonia-lyase Genomic Order:  358
Name:  ? AL6G13850 Secondary Identifier:  ? PAC:35928083

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-1121 Arabidopsis lyrata pathologic  
Alyrata PWY1F-467 Arabidopsis lyrata pathologic  
Alyrata PWY-7186 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G13850 0.5kb upstream 0.5kb upstream 4235   true scaffold_6: 1370415-1374649 Arabidopsis lyrata
AL6G13850 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 1370415-1370914 Arabidopsis lyrata
AL6G13850 0.5kb downstream 0.5kb downstream 4235   true scaffold_6: 1370915-1375149 Arabidopsis lyrata
AL6G13850 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 1374650-1375149 Arabidopsis lyrata
AL6G13850 1.0kb upstream 1.0kb upstream 4735   true scaffold_6: 1369915-1374649 Arabidopsis lyrata
AL6G13850 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 1369915-1370914 Arabidopsis lyrata
AL6G13850 1.0kb downstream 1.0kb downstream 4735   true scaffold_6: 1370915-1375649 Arabidopsis lyrata
AL6G13850 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 1374650-1375649 Arabidopsis lyrata
AL6G13850 2.0kb upstream 2.0kb upstream 5735   true scaffold_6: 1368915-1374649 Arabidopsis lyrata
AL6G13850 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 1368915-1370914 Arabidopsis lyrata
AL6G13850 2.0kb downstream 2.0kb downstream 5735   true scaffold_6: 1370915-1376649 Arabidopsis lyrata
AL6G13850 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 1374650-1376649 Arabidopsis lyrata
AL6G13850 5.0kb upstream 5.0kb upstream 8735   true scaffold_6: 1365915-1374649 Arabidopsis lyrata
AL6G13850 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 1365915-1370914 Arabidopsis lyrata
AL6G13850 5.0kb downstream 5.0kb downstream 8735   true scaffold_6: 1370915-1379649 Arabidopsis lyrata
AL6G13850 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 1374650-1379649 Arabidopsis lyrata
AL6G13850 10.0kb upstream 10.0kb upstream 13735   true scaffold_6: 1360915-1374649 Arabidopsis lyrata
AL6G13850 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 1360915-1370914 Arabidopsis lyrata
AL6G13850 10.0kb downstream 10.0kb downstream 13735   true scaffold_6: 1370915-1384649 Arabidopsis lyrata
AL6G13850 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 1374650-1384649 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510395 5273 Angiosperm View MSA
122363337 5261 Brassicaceae View MSA
123798519 5264 Brassicales-Malvales View MSA
124296145 5266 SBM View MSA
124148382 5268 Malvidae View MSA
123874381 5270 Rosid View MSA
123458365 5271 Pentapetalae View MSA
122493771 5272 Eudicot View MSA
120783497 5274 Embryophyte View MSA
122825501 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain