Gene : AL6G13800 A. lyrata v2.1

Defline:  (1 of 3) PTHR18952:SF111 - ALPHA CARBONIC ANHYDRASE 3 Genomic Order:  353
Name:  ? AL6G13800 Secondary Identifier:  ? PAC:35928604

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata CYANCAT-PWY Arabidopsis lyrata pathologic  
Alyrata PWY-241 Arabidopsis lyrata pathologic  
Alyrata PWY-7115 Arabidopsis lyrata pathologic  
Alyrata PWY-7117 Arabidopsis lyrata pathologic  
Alyrata PWYQT-4429 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G13800 0.5kb upstream 0.5kb upstream 2272   true scaffold_6: 1356579-1358850 Arabidopsis lyrata
AL6G13800 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 1358351-1358850 Arabidopsis lyrata
AL6G13800 0.5kb downstream 0.5kb downstream 2272   true scaffold_6: 1356079-1358350 Arabidopsis lyrata
AL6G13800 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 1356079-1356578 Arabidopsis lyrata
AL6G13800 1.0kb upstream 1.0kb upstream 2772   true scaffold_6: 1356579-1359350 Arabidopsis lyrata
AL6G13800 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 1358351-1359350 Arabidopsis lyrata
AL6G13800 1.0kb downstream 1.0kb downstream 2772   true scaffold_6: 1355579-1358350 Arabidopsis lyrata
AL6G13800 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 1355579-1356578 Arabidopsis lyrata
AL6G13800 2.0kb upstream 2.0kb upstream 3772   true scaffold_6: 1356579-1360350 Arabidopsis lyrata
AL6G13800 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 1358351-1360350 Arabidopsis lyrata
AL6G13800 2.0kb downstream 2.0kb downstream 3772   true scaffold_6: 1354579-1358350 Arabidopsis lyrata
AL6G13800 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 1354579-1356578 Arabidopsis lyrata
AL6G13800 5.0kb upstream 5.0kb upstream 6772   true scaffold_6: 1356579-1363350 Arabidopsis lyrata
AL6G13800 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 1358351-1363350 Arabidopsis lyrata
AL6G13800 5.0kb downstream 5.0kb downstream 6772   true scaffold_6: 1351579-1358350 Arabidopsis lyrata
AL6G13800 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 1351579-1356578 Arabidopsis lyrata
AL6G13800 10.0kb upstream 10.0kb upstream 11772   true scaffold_6: 1356579-1368350 Arabidopsis lyrata
AL6G13800 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 1358351-1368350 Arabidopsis lyrata
AL6G13800 10.0kb downstream 10.0kb downstream 11772   true scaffold_6: 1346579-1358350 Arabidopsis lyrata
AL6G13800 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 1346579-1356578 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510291 5273 Angiosperm View MSA
122361579 5261 Brassicaceae View MSA
123798204 5264 Brassicales-Malvales View MSA
124295875 5266 SBM View MSA
124148192 5268 Malvidae View MSA
123874239 5270 Rosid View MSA
123458243 5271 Pentapetalae View MSA
122493651 5272 Eudicot View MSA
120783396 5274 Embryophyte View MSA
123428273 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain