Gene : AL6G13880 A. lyrata v2.1

Defline:  (1 of 1) PTHR10438:SF297 - THIOREDOXIN-LIKE 3-2, CHLOROPLASTIC Genomic Order:  361
Name:  ? AL6G13880 Secondary Identifier:  ? PAC:35929968

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G13880 0.5kb upstream 0.5kb upstream 2085   true scaffold_6: 1385346-1387430 Arabidopsis lyrata
AL6G13880 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 1386931-1387430 Arabidopsis lyrata
AL6G13880 0.5kb downstream 0.5kb downstream 2085   true scaffold_6: 1384846-1386930 Arabidopsis lyrata
AL6G13880 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 1384846-1385345 Arabidopsis lyrata
AL6G13880 1.0kb upstream 1.0kb upstream 2585   true scaffold_6: 1385346-1387930 Arabidopsis lyrata
AL6G13880 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 1386931-1387930 Arabidopsis lyrata
AL6G13880 1.0kb downstream 1.0kb downstream 2585   true scaffold_6: 1384346-1386930 Arabidopsis lyrata
AL6G13880 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 1384346-1385345 Arabidopsis lyrata
AL6G13880 2.0kb upstream 2.0kb upstream 3585   true scaffold_6: 1385346-1388930 Arabidopsis lyrata
AL6G13880 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 1386931-1388930 Arabidopsis lyrata
AL6G13880 2.0kb downstream 2.0kb downstream 3585   true scaffold_6: 1383346-1386930 Arabidopsis lyrata
AL6G13880 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 1383346-1385345 Arabidopsis lyrata
AL6G13880 5.0kb upstream 5.0kb upstream 6585   true scaffold_6: 1385346-1391930 Arabidopsis lyrata
AL6G13880 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 1386931-1391930 Arabidopsis lyrata
AL6G13880 5.0kb downstream 5.0kb downstream 6585   true scaffold_6: 1380346-1386930 Arabidopsis lyrata
AL6G13880 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 1380346-1385345 Arabidopsis lyrata
AL6G13880 10.0kb upstream 10.0kb upstream 11585   true scaffold_6: 1385346-1396930 Arabidopsis lyrata
AL6G13880 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 1386931-1396930 Arabidopsis lyrata
AL6G13880 10.0kb downstream 10.0kb downstream 11585   true scaffold_6: 1375346-1386930 Arabidopsis lyrata
AL6G13880 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 1375346-1385345 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370617 5261 Brassicaceae View MSA
123834100 5264 Brassicales-Malvales View MSA
124345409 5266 SBM View MSA
124244940 5268 Malvidae View MSA
124062487 5270 Rosid View MSA
123752896 5271 Pentapetalae View MSA
122787766 5272 Eudicot View MSA
122051543 5273 Angiosperm View MSA
121347731 5274 Embryophyte View MSA
123380608 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain