Gene : AL6G16870 A. lyrata v2.1

Defline:  (1 of 1) PTHR33493:SF2 - LATE EMBRYOGENESIS ABUNDANT PROTEIN 4-5 Genomic Order:  649
Name:  ? AL6G16870 Secondary Identifier:  ? PAC:35928766

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G16870 0.5kb upstream 0.5kb upstream 1361   true scaffold_6: 2565927-2567287 Arabidopsis lyrata
AL6G16870 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 2566788-2567287 Arabidopsis lyrata
AL6G16870 0.5kb downstream 0.5kb downstream 1361   true scaffold_6: 2565427-2566787 Arabidopsis lyrata
AL6G16870 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 2565427-2565926 Arabidopsis lyrata
AL6G16870 1.0kb upstream 1.0kb upstream 1861   true scaffold_6: 2565927-2567787 Arabidopsis lyrata
AL6G16870 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 2566788-2567787 Arabidopsis lyrata
AL6G16870 1.0kb downstream 1.0kb downstream 1861   true scaffold_6: 2564927-2566787 Arabidopsis lyrata
AL6G16870 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 2564927-2565926 Arabidopsis lyrata
AL6G16870 2.0kb upstream 2.0kb upstream 2861   true scaffold_6: 2565927-2568787 Arabidopsis lyrata
AL6G16870 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 2566788-2568787 Arabidopsis lyrata
AL6G16870 2.0kb downstream 2.0kb downstream 2861   true scaffold_6: 2563927-2566787 Arabidopsis lyrata
AL6G16870 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 2563927-2565926 Arabidopsis lyrata
AL6G16870 5.0kb upstream 5.0kb upstream 5861   true scaffold_6: 2565927-2571787 Arabidopsis lyrata
AL6G16870 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 2566788-2571787 Arabidopsis lyrata
AL6G16870 5.0kb downstream 5.0kb downstream 5861   true scaffold_6: 2560927-2566787 Arabidopsis lyrata
AL6G16870 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 2560927-2565926 Arabidopsis lyrata
AL6G16870 10.0kb upstream 10.0kb upstream 10861   true scaffold_6: 2565927-2576787 Arabidopsis lyrata
AL6G16870 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 2566788-2576787 Arabidopsis lyrata
AL6G16870 10.0kb downstream 10.0kb downstream 10861   true scaffold_6: 2555927-2566787 Arabidopsis lyrata
AL6G16870 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 2555927-2565926 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373808 5261 Brassicaceae View MSA
123829497 5264 Brassicales-Malvales View MSA
124345783 5266 SBM View MSA
124245012 5268 Malvidae View MSA
124073958 5270 Rosid View MSA
123749159 5271 Pentapetalae View MSA
122794913 5272 Eudicot View MSA
122046443 5273 Angiosperm View MSA
121349982 5274 Embryophyte View MSA
123381528 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain