Gene : AL6G15840 A. lyrata v2.1

Defline:  (1 of 1) 2.5.1.46 - Deoxyhypusine synthase / Spermidine dehydrogenase Genomic Order:  551
Name:  ? AL6G15840 Secondary Identifier:  ? PAC:35926102

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5905 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G15840 0.5kb upstream 0.5kb upstream 2867   true scaffold_6: 2180948-2183814 Arabidopsis lyrata
AL6G15840 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 2183315-2183814 Arabidopsis lyrata
AL6G15840 0.5kb downstream 0.5kb downstream 2867   true scaffold_6: 2180448-2183314 Arabidopsis lyrata
AL6G15840 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 2180448-2180947 Arabidopsis lyrata
AL6G15840 1.0kb upstream 1.0kb upstream 3367   true scaffold_6: 2180948-2184314 Arabidopsis lyrata
AL6G15840 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 2183315-2184314 Arabidopsis lyrata
AL6G15840 1.0kb downstream 1.0kb downstream 3367   true scaffold_6: 2179948-2183314 Arabidopsis lyrata
AL6G15840 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 2179948-2180947 Arabidopsis lyrata
AL6G15840 2.0kb upstream 2.0kb upstream 4367   true scaffold_6: 2180948-2185314 Arabidopsis lyrata
AL6G15840 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 2183315-2185314 Arabidopsis lyrata
AL6G15840 2.0kb downstream 2.0kb downstream 4367   true scaffold_6: 2178948-2183314 Arabidopsis lyrata
AL6G15840 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 2178948-2180947 Arabidopsis lyrata
AL6G15840 5.0kb upstream 5.0kb upstream 7367   true scaffold_6: 2180948-2188314 Arabidopsis lyrata
AL6G15840 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 2183315-2188314 Arabidopsis lyrata
AL6G15840 5.0kb downstream 5.0kb downstream 7367   true scaffold_6: 2175948-2183314 Arabidopsis lyrata
AL6G15840 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 2175948-2180947 Arabidopsis lyrata
AL6G15840 10.0kb upstream 10.0kb upstream 12367   true scaffold_6: 2180948-2193314 Arabidopsis lyrata
AL6G15840 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 2183315-2193314 Arabidopsis lyrata
AL6G15840 10.0kb downstream 10.0kb downstream 12367   true scaffold_6: 2170948-2183314 Arabidopsis lyrata
AL6G15840 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 2170948-2180947 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363410 5261 Brassicaceae View MSA
123829955 5264 Brassicales-Malvales View MSA
124340739 5266 SBM View MSA
124241144 5268 Malvidae View MSA
124061456 5270 Rosid View MSA
123736781 5271 Pentapetalae View MSA
122791984 5272 Eudicot View MSA
122048082 5273 Angiosperm View MSA
121345605 5274 Embryophyte View MSA
123427897 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain