Gene : AL6G15290 A. lyrata v2.1

Defline:  (1 of 2) PTHR11709:SF22 - LACCASE-12-RELATED Genomic Order:  499
Name:  ? AL6G15290 Secondary Identifier:  ? PAC:35928058

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5466 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G15290 0.5kb upstream 0.5kb upstream 2977   true scaffold_6: 1963745-1966721 Arabidopsis lyrata
AL6G15290 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 1963745-1964244 Arabidopsis lyrata
AL6G15290 0.5kb downstream 0.5kb downstream 2977   true scaffold_6: 1964245-1967221 Arabidopsis lyrata
AL6G15290 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 1966722-1967221 Arabidopsis lyrata
AL6G15290 1.0kb upstream 1.0kb upstream 3477   true scaffold_6: 1963245-1966721 Arabidopsis lyrata
AL6G15290 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 1963245-1964244 Arabidopsis lyrata
AL6G15290 1.0kb downstream 1.0kb downstream 3477   true scaffold_6: 1964245-1967721 Arabidopsis lyrata
AL6G15290 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 1966722-1967721 Arabidopsis lyrata
AL6G15290 2.0kb upstream 2.0kb upstream 4477   true scaffold_6: 1962245-1966721 Arabidopsis lyrata
AL6G15290 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 1962245-1964244 Arabidopsis lyrata
AL6G15290 2.0kb downstream 2.0kb downstream 4477   true scaffold_6: 1964245-1968721 Arabidopsis lyrata
AL6G15290 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 1966722-1968721 Arabidopsis lyrata
AL6G15290 5.0kb upstream 5.0kb upstream 7477   true scaffold_6: 1959245-1966721 Arabidopsis lyrata
AL6G15290 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 1959245-1964244 Arabidopsis lyrata
AL6G15290 5.0kb downstream 5.0kb downstream 7477   true scaffold_6: 1964245-1971721 Arabidopsis lyrata
AL6G15290 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 1966722-1971721 Arabidopsis lyrata
AL6G15290 10.0kb upstream 10.0kb upstream 12477   true scaffold_6: 1954245-1966721 Arabidopsis lyrata
AL6G15290 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 1954245-1964244 Arabidopsis lyrata
AL6G15290 10.0kb downstream 10.0kb downstream 12477   true scaffold_6: 1964245-1976721 Arabidopsis lyrata
AL6G15290 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 1966722-1976721 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375809 5261 Brassicaceae View MSA
123837056 5264 Brassicales-Malvales View MSA
124338843 5266 SBM View MSA
124253319 5268 Malvidae View MSA
124063263 5270 Rosid View MSA
123746086 5271 Pentapetalae View MSA
122788360 5272 Eudicot View MSA
122044394 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain