Gene : AL6G20150 A. lyrata v2.1

Defline:  (1 of 2) PTHR12565:SF125 - TRANSCRIPTION FACTOR HEC3-RELATED Genomic Order:  957
Name:  ? AL6G20150 Secondary Identifier:  ? PAC:35929975

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G20150 0.5kb upstream 0.5kb upstream 1464   true scaffold_6: 3840369-3841832 Arabidopsis lyrata
AL6G20150 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 3841333-3841832 Arabidopsis lyrata
AL6G20150 0.5kb downstream 0.5kb downstream 1464   true scaffold_6: 3839869-3841332 Arabidopsis lyrata
AL6G20150 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 3839869-3840368 Arabidopsis lyrata
AL6G20150 1.0kb upstream 1.0kb upstream 1964   true scaffold_6: 3840369-3842332 Arabidopsis lyrata
AL6G20150 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 3841333-3842332 Arabidopsis lyrata
AL6G20150 1.0kb downstream 1.0kb downstream 1964   true scaffold_6: 3839369-3841332 Arabidopsis lyrata
AL6G20150 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 3839369-3840368 Arabidopsis lyrata
AL6G20150 2.0kb upstream 2.0kb upstream 2964   true scaffold_6: 3840369-3843332 Arabidopsis lyrata
AL6G20150 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 3841333-3843332 Arabidopsis lyrata
AL6G20150 2.0kb downstream 2.0kb downstream 2964   true scaffold_6: 3838369-3841332 Arabidopsis lyrata
AL6G20150 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 3838369-3840368 Arabidopsis lyrata
AL6G20150 5.0kb upstream 5.0kb upstream 5964   true scaffold_6: 3840369-3846332 Arabidopsis lyrata
AL6G20150 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 3841333-3846332 Arabidopsis lyrata
AL6G20150 5.0kb downstream 5.0kb downstream 5964   true scaffold_6: 3835369-3841332 Arabidopsis lyrata
AL6G20150 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 3835369-3840368 Arabidopsis lyrata
AL6G20150 10.0kb upstream 10.0kb upstream 10964   true scaffold_6: 3840369-3851332 Arabidopsis lyrata
AL6G20150 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 3841333-3851332 Arabidopsis lyrata
AL6G20150 10.0kb downstream 10.0kb downstream 10964   true scaffold_6: 3830369-3841332 Arabidopsis lyrata
AL6G20150 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 3830369-3840368 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374077 5261 Brassicaceae View MSA
123830128 5264 Brassicales-Malvales View MSA
124321656 5266 SBM View MSA
124245239 5268 Malvidae View MSA
124065698 5270 Rosid View MSA
123745456 5271 Pentapetalae View MSA
122795730 5272 Eudicot View MSA
122049789 5273 Angiosperm View MSA
121351233 5274 Embryophyte View MSA
123382070 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain