Gene : AL6G18090 A. lyrata v2.1

Defline:  (1 of 5) K08238 - xyloglucan 6-xylosyltransferase [EC:2.4.2.39] Xyl a1-6 Glc (XXT) Genomic Order:  761
Name:  ? AL6G18090 Secondary Identifier:  ? PAC:35926407

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-5936 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G18090 0.5kb upstream 0.5kb upstream 2100   true scaffold_6: 3017186-3019285 Arabidopsis lyrata
AL6G18090 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 3017186-3017685 Arabidopsis lyrata
AL6G18090 0.5kb downstream 0.5kb downstream 2100   true scaffold_6: 3017686-3019785 Arabidopsis lyrata
AL6G18090 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 3019286-3019785 Arabidopsis lyrata
AL6G18090 1.0kb upstream 1.0kb upstream 2600   true scaffold_6: 3016686-3019285 Arabidopsis lyrata
AL6G18090 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 3016686-3017685 Arabidopsis lyrata
AL6G18090 1.0kb downstream 1.0kb downstream 2600   true scaffold_6: 3017686-3020285 Arabidopsis lyrata
AL6G18090 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 3019286-3020285 Arabidopsis lyrata
AL6G18090 2.0kb upstream 2.0kb upstream 3600   true scaffold_6: 3015686-3019285 Arabidopsis lyrata
AL6G18090 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 3015686-3017685 Arabidopsis lyrata
AL6G18090 2.0kb downstream 2.0kb downstream 3600   true scaffold_6: 3017686-3021285 Arabidopsis lyrata
AL6G18090 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 3019286-3021285 Arabidopsis lyrata
AL6G18090 5.0kb upstream 5.0kb upstream 6600   true scaffold_6: 3012686-3019285 Arabidopsis lyrata
AL6G18090 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 3012686-3017685 Arabidopsis lyrata
AL6G18090 5.0kb downstream 5.0kb downstream 6600   true scaffold_6: 3017686-3024285 Arabidopsis lyrata
AL6G18090 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 3019286-3024285 Arabidopsis lyrata
AL6G18090 10.0kb upstream 10.0kb upstream 11600   true scaffold_6: 3007686-3019285 Arabidopsis lyrata
AL6G18090 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 3007686-3017685 Arabidopsis lyrata
AL6G18090 10.0kb downstream 10.0kb downstream 11600   true scaffold_6: 3017686-3029285 Arabidopsis lyrata
AL6G18090 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 3019286-3029285 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364851 5261 Brassicaceae View MSA
123798849 5264 Brassicales-Malvales View MSA
124296432 5266 SBM View MSA
124148587 5268 Malvidae View MSA
124066918 5270 Rosid View MSA
123741049 5271 Pentapetalae View MSA
122787674 5272 Eudicot View MSA
122047290 5273 Angiosperm View MSA
121349054 5274 Embryophyte View MSA
123428220 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain