Gene : AL6G52390 A. lyrata v2.1
Defline:  (1 of 6) PTHR10217:SF465 - CYCLIC NUCLEOTIDE-GATED ION CHANNEL 11-RELATED Genomic Order:  3919
Name:  ? AL6G52390 Secondary Identifier:  ? PAC:35927741
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G52390 0.5kb upstream 0.5kb upstream 3664   true scaffold_6: 24538358-24542021 Arabidopsis lyrata
AL6G52390 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 24538358-24538857 Arabidopsis lyrata
AL6G52390 0.5kb downstream 0.5kb downstream 3664   true scaffold_6: 24538858-24542521 Arabidopsis lyrata
AL6G52390 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 24542022-24542521 Arabidopsis lyrata
AL6G52390 1.0kb upstream 1.0kb upstream 4164   true scaffold_6: 24537858-24542021 Arabidopsis lyrata
AL6G52390 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 24537858-24538857 Arabidopsis lyrata
AL6G52390 1.0kb downstream 1.0kb downstream 4164   true scaffold_6: 24538858-24543021 Arabidopsis lyrata
AL6G52390 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 24542022-24543021 Arabidopsis lyrata
AL6G52390 2.0kb upstream 2.0kb upstream 5164   true scaffold_6: 24536858-24542021 Arabidopsis lyrata
AL6G52390 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 24536858-24538857 Arabidopsis lyrata
AL6G52390 2.0kb downstream 2.0kb downstream 5164   true scaffold_6: 24538858-24544021 Arabidopsis lyrata
AL6G52390 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 24542022-24544021 Arabidopsis lyrata
AL6G52390 5.0kb upstream 5.0kb upstream 8164   true scaffold_6: 24533858-24542021 Arabidopsis lyrata
AL6G52390 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 24533858-24538857 Arabidopsis lyrata
AL6G52390 5.0kb downstream 5.0kb downstream 8164   true scaffold_6: 24538858-24547021 Arabidopsis lyrata
AL6G52390 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 24542022-24547021 Arabidopsis lyrata
AL6G52390 10.0kb upstream 10.0kb upstream 13164   true scaffold_6: 24528858-24542021 Arabidopsis lyrata
AL6G52390 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 24528858-24538857 Arabidopsis lyrata
AL6G52390 10.0kb downstream 10.0kb downstream 13164   true scaffold_6: 24538858-24552021 Arabidopsis lyrata
AL6G52390 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 24542022-24552021 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362950 5261 Brassicaceae View MSA
123838813 5264 Brassicales-Malvales View MSA
124348165 5266 SBM View MSA
124239659 5268 Malvidae View MSA
124050847 5270 Rosid View MSA
123745876 5271 Pentapetalae View MSA
122785866 5272 Eudicot View MSA
122044448 5273 Angiosperm View MSA
121351754 5274 Embryophyte View MSA
123428762 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain