Gene : AL6G31250 A. lyrata v2.1

Defline:  (1 of 1) PTHR31321:SF17 - PECTINESTERASE 53-RELATED Genomic Order:  2012
Name:  ? AL6G31250 Secondary Identifier:  ? PAC:35928382

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-1081 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G31250 0.5kb upstream 0.5kb upstream 3705   true scaffold_6: 8341437-8345141 Arabidopsis lyrata
AL6G31250 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 8341437-8341936 Arabidopsis lyrata
AL6G31250 0.5kb downstream 0.5kb downstream 3705   true scaffold_6: 8341937-8345641 Arabidopsis lyrata
AL6G31250 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 8345142-8345641 Arabidopsis lyrata
AL6G31250 1.0kb upstream 1.0kb upstream 4205   true scaffold_6: 8340937-8345141 Arabidopsis lyrata
AL6G31250 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 8340937-8341936 Arabidopsis lyrata
AL6G31250 1.0kb downstream 1.0kb downstream 4205   true scaffold_6: 8341937-8346141 Arabidopsis lyrata
AL6G31250 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 8345142-8346141 Arabidopsis lyrata
AL6G31250 2.0kb upstream 2.0kb upstream 5205   true scaffold_6: 8339937-8345141 Arabidopsis lyrata
AL6G31250 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 8339937-8341936 Arabidopsis lyrata
AL6G31250 2.0kb downstream 2.0kb downstream 5205   true scaffold_6: 8341937-8347141 Arabidopsis lyrata
AL6G31250 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 8345142-8347141 Arabidopsis lyrata
AL6G31250 5.0kb upstream 5.0kb upstream 8205   true scaffold_6: 8336937-8345141 Arabidopsis lyrata
AL6G31250 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 8336937-8341936 Arabidopsis lyrata
AL6G31250 5.0kb downstream 5.0kb downstream 8205   true scaffold_6: 8341937-8350141 Arabidopsis lyrata
AL6G31250 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 8345142-8350141 Arabidopsis lyrata
AL6G31250 10.0kb upstream 10.0kb upstream 13205   true scaffold_6: 8331937-8345141 Arabidopsis lyrata
AL6G31250 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 8331937-8341936 Arabidopsis lyrata
AL6G31250 10.0kb downstream 10.0kb downstream 13205   true scaffold_6: 8341937-8355141 Arabidopsis lyrata
AL6G31250 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 8345142-8355141 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373168 5261 Brassicaceae View MSA
123835653 5264 Brassicales-Malvales View MSA
124350077 5266 SBM View MSA
124237911 5268 Malvidae View MSA
124072507 5270 Rosid View MSA
123749386 5271 Pentapetalae View MSA
122794986 5272 Eudicot View MSA
122041979 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain