Gene : AL6G29730 A. lyrata v2.1

Defline:  (1 of 6) PF13041//PF13812 - PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  1866
Name:  ? AL6G29730 Secondary Identifier:  ? PAC:35926795

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G29730 0.5kb upstream 0.5kb upstream 2375   true scaffold_6: 7683903-7686277 Arabidopsis lyrata
AL6G29730 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 7685778-7686277 Arabidopsis lyrata
AL6G29730 0.5kb downstream 0.5kb downstream 2375   true scaffold_6: 7683403-7685777 Arabidopsis lyrata
AL6G29730 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 7683403-7683902 Arabidopsis lyrata
AL6G29730 1.0kb upstream 1.0kb upstream 2875   true scaffold_6: 7683903-7686777 Arabidopsis lyrata
AL6G29730 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 7685778-7686777 Arabidopsis lyrata
AL6G29730 1.0kb downstream 1.0kb downstream 2875   true scaffold_6: 7682903-7685777 Arabidopsis lyrata
AL6G29730 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 7682903-7683902 Arabidopsis lyrata
AL6G29730 2.0kb upstream 2.0kb upstream 3875   true scaffold_6: 7683903-7687777 Arabidopsis lyrata
AL6G29730 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 7685778-7687777 Arabidopsis lyrata
AL6G29730 2.0kb downstream 2.0kb downstream 3875   true scaffold_6: 7681903-7685777 Arabidopsis lyrata
AL6G29730 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 7681903-7683902 Arabidopsis lyrata
AL6G29730 5.0kb upstream 5.0kb upstream 6875   true scaffold_6: 7683903-7690777 Arabidopsis lyrata
AL6G29730 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 7685778-7690777 Arabidopsis lyrata
AL6G29730 5.0kb downstream 5.0kb downstream 6875   true scaffold_6: 7678903-7685777 Arabidopsis lyrata
AL6G29730 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 7678903-7683902 Arabidopsis lyrata
AL6G29730 10.0kb upstream 10.0kb upstream 11875   true scaffold_6: 7683903-7695777 Arabidopsis lyrata
AL6G29730 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 7685778-7695777 Arabidopsis lyrata
AL6G29730 10.0kb downstream 10.0kb downstream 11875   true scaffold_6: 7673903-7685777 Arabidopsis lyrata
AL6G29730 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 7673903-7683902 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373682 5261 Brassicaceae View MSA
123831057 5264 Brassicales-Malvales View MSA
124338046 5266 SBM View MSA
124252725 5268 Malvidae View MSA
124068933 5270 Rosid View MSA
123750623 5271 Pentapetalae View MSA
122791820 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain