Gene : AL6G29690 A. lyrata v2.1

Defline:  (1 of 1) PTHR13309 - NUCLEAR FRAGILE X MENTAL RETARDATION PROTEIN INTERACTING PROTEIN 1 Genomic Order:  1862
Name:  ? AL6G29690 Secondary Identifier:  ? PAC:35927836

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G29690 0.5kb upstream 0.5kb upstream 3428   true scaffold_6: 7662552-7665979 Arabidopsis lyrata
AL6G29690 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 7662552-7663051 Arabidopsis lyrata
AL6G29690 0.5kb downstream 0.5kb downstream 3428   true scaffold_6: 7663052-7666479 Arabidopsis lyrata
AL6G29690 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 7665980-7666479 Arabidopsis lyrata
AL6G29690 1.0kb upstream 1.0kb upstream 3928   true scaffold_6: 7662052-7665979 Arabidopsis lyrata
AL6G29690 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 7662052-7663051 Arabidopsis lyrata
AL6G29690 1.0kb downstream 1.0kb downstream 3928   true scaffold_6: 7663052-7666979 Arabidopsis lyrata
AL6G29690 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 7665980-7666979 Arabidopsis lyrata
AL6G29690 2.0kb upstream 2.0kb upstream 4928   true scaffold_6: 7661052-7665979 Arabidopsis lyrata
AL6G29690 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 7661052-7663051 Arabidopsis lyrata
AL6G29690 2.0kb downstream 2.0kb downstream 4928   true scaffold_6: 7663052-7667979 Arabidopsis lyrata
AL6G29690 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 7665980-7667979 Arabidopsis lyrata
AL6G29690 5.0kb upstream 5.0kb upstream 7928   true scaffold_6: 7658052-7665979 Arabidopsis lyrata
AL6G29690 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 7658052-7663051 Arabidopsis lyrata
AL6G29690 5.0kb downstream 5.0kb downstream 7928   true scaffold_6: 7663052-7670979 Arabidopsis lyrata
AL6G29690 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 7665980-7670979 Arabidopsis lyrata
AL6G29690 10.0kb upstream 10.0kb upstream 12928   true scaffold_6: 7653052-7665979 Arabidopsis lyrata
AL6G29690 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 7653052-7663051 Arabidopsis lyrata
AL6G29690 10.0kb downstream 10.0kb downstream 12928   true scaffold_6: 7663052-7675979 Arabidopsis lyrata
AL6G29690 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 7665980-7675979 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361484 5261 Brassicaceae View MSA
123829474 5264 Brassicales-Malvales View MSA
124336876 5266 SBM View MSA
124244086 5268 Malvidae View MSA
124063350 5270 Rosid View MSA
123737690 5271 Pentapetalae View MSA
122793852 5272 Eudicot View MSA
122042641 5273 Angiosperm View MSA
121348724 5274 Embryophyte View MSA
123425996 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain