Gene : AL6G29330 A. lyrata v2.1

Defline:  (1 of 2) PTHR33646:SF2 - F20H23.8 PROTEIN-RELATED Genomic Order:  1827
Name:  ? AL6G29330 Secondary Identifier:  ? PAC:35925801

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G29330 0.5kb upstream 0.5kb upstream 2444   true scaffold_6: 7526921-7529364 Arabidopsis lyrata
AL6G29330 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 7526921-7527420 Arabidopsis lyrata
AL6G29330 0.5kb downstream 0.5kb downstream 2444   true scaffold_6: 7527421-7529864 Arabidopsis lyrata
AL6G29330 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 7529365-7529864 Arabidopsis lyrata
AL6G29330 1.0kb upstream 1.0kb upstream 2944   true scaffold_6: 7526421-7529364 Arabidopsis lyrata
AL6G29330 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 7526421-7527420 Arabidopsis lyrata
AL6G29330 1.0kb downstream 1.0kb downstream 2944   true scaffold_6: 7527421-7530364 Arabidopsis lyrata
AL6G29330 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 7529365-7530364 Arabidopsis lyrata
AL6G29330 2.0kb upstream 2.0kb upstream 3944   true scaffold_6: 7525421-7529364 Arabidopsis lyrata
AL6G29330 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 7525421-7527420 Arabidopsis lyrata
AL6G29330 2.0kb downstream 2.0kb downstream 3944   true scaffold_6: 7527421-7531364 Arabidopsis lyrata
AL6G29330 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 7529365-7531364 Arabidopsis lyrata
AL6G29330 5.0kb upstream 5.0kb upstream 6944   true scaffold_6: 7522421-7529364 Arabidopsis lyrata
AL6G29330 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 7522421-7527420 Arabidopsis lyrata
AL6G29330 5.0kb downstream 5.0kb downstream 6944   true scaffold_6: 7527421-7534364 Arabidopsis lyrata
AL6G29330 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 7529365-7534364 Arabidopsis lyrata
AL6G29330 10.0kb upstream 10.0kb upstream 11944   true scaffold_6: 7517421-7529364 Arabidopsis lyrata
AL6G29330 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 7517421-7527420 Arabidopsis lyrata
AL6G29330 10.0kb downstream 10.0kb downstream 11944   true scaffold_6: 7527421-7539364 Arabidopsis lyrata
AL6G29330 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 7529365-7539364 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363762 5261 Brassicaceae View MSA
123837615 5264 Brassicales-Malvales View MSA
124339499 5266 SBM View MSA
124251286 5268 Malvidae View MSA
124064474 5270 Rosid View MSA
123748778 5271 Pentapetalae View MSA
122792798 5272 Eudicot View MSA
122044291 5273 Angiosperm View MSA
121310268 5274 Embryophyte View MSA
123347804 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain