Gene : AL6G29400 A. lyrata v2.1

Defline:  (1 of 1) K00965 - UDPglucose--hexose-1-phosphate uridylyltransferase (galT, GALT) Genomic Order:  1834
Name:  ? AL6G29400 Secondary Identifier:  ? PAC:35929949

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Alyrata PWY-3821 Arabidopsis lyrata pathologic  
Alyrata PWY-6527 Arabidopsis lyrata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AL6G29400 0.5kb upstream 0.5kb upstream 2119   true scaffold_6: 7547941-7550059 Arabidopsis lyrata
AL6G29400 0.5kb upstream 0.5kb upstream 500   false scaffold_6: 7547941-7548440 Arabidopsis lyrata
AL6G29400 0.5kb downstream 0.5kb downstream 2119   true scaffold_6: 7548441-7550559 Arabidopsis lyrata
AL6G29400 0.5kb downstream 0.5kb downstream 500   false scaffold_6: 7550060-7550559 Arabidopsis lyrata
AL6G29400 1.0kb upstream 1.0kb upstream 2619   true scaffold_6: 7547441-7550059 Arabidopsis lyrata
AL6G29400 1.0kb upstream 1.0kb upstream 1000   false scaffold_6: 7547441-7548440 Arabidopsis lyrata
AL6G29400 1.0kb downstream 1.0kb downstream 2619   true scaffold_6: 7548441-7551059 Arabidopsis lyrata
AL6G29400 1.0kb downstream 1.0kb downstream 1000   false scaffold_6: 7550060-7551059 Arabidopsis lyrata
AL6G29400 2.0kb upstream 2.0kb upstream 3619   true scaffold_6: 7546441-7550059 Arabidopsis lyrata
AL6G29400 2.0kb upstream 2.0kb upstream 2000   false scaffold_6: 7546441-7548440 Arabidopsis lyrata
AL6G29400 2.0kb downstream 2.0kb downstream 3619   true scaffold_6: 7548441-7552059 Arabidopsis lyrata
AL6G29400 2.0kb downstream 2.0kb downstream 2000   false scaffold_6: 7550060-7552059 Arabidopsis lyrata
AL6G29400 5.0kb upstream 5.0kb upstream 6619   true scaffold_6: 7543441-7550059 Arabidopsis lyrata
AL6G29400 5.0kb upstream 5.0kb upstream 5000   false scaffold_6: 7543441-7548440 Arabidopsis lyrata
AL6G29400 5.0kb downstream 5.0kb downstream 6619   true scaffold_6: 7548441-7555059 Arabidopsis lyrata
AL6G29400 5.0kb downstream 5.0kb downstream 5000   false scaffold_6: 7550060-7555059 Arabidopsis lyrata
AL6G29400 10.0kb upstream 10.0kb upstream 11619   true scaffold_6: 7538441-7550059 Arabidopsis lyrata
AL6G29400 10.0kb upstream 10.0kb upstream 10000   false scaffold_6: 7538441-7548440 Arabidopsis lyrata
AL6G29400 10.0kb downstream 10.0kb downstream 11619   true scaffold_6: 7548441-7560059 Arabidopsis lyrata
AL6G29400 10.0kb downstream 10.0kb downstream 10000   false scaffold_6: 7550060-7560059 Arabidopsis lyrata

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372456 5261 Brassicaceae View MSA
123831342 5264 Brassicales-Malvales View MSA
124340520 5266 SBM View MSA
124240726 5268 Malvidae View MSA
124069087 5270 Rosid View MSA
123737596 5271 Pentapetalae View MSA
122790706 5272 Eudicot View MSA
122047985 5273 Angiosperm View MSA
121344081 5274 Embryophyte View MSA
123379971 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain